| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2545 |
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| Symbol | |
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| ID | 6463731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2613346 |
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| End bp | 2614290 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642728702 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002019324 |
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| Protein GI | 194337530 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGG ATCATTCAGG GCAAAACGTA GAAAAAAGTC CGCACAAGAT TCCGAAAGAG
ATCGGTTATG GATGGTTTCA GGCAATGCAT TTGCCGTTGA ACATGGTTGT TCGCAAAAGC
CATATTCAGT TCCGGCATGA AGTAGCAGGA AGGCTCTTCC CTGCCCTGAC GGCTGTTGAG
CAGTTTACCG AACCGGTGCT GTGTGTGCAG TCCGCAAGGA AAGGGCGTGT GATTCTTTCG
GTTAACCGGA ATGGAGATGA GTGTATCATC GACCATAACA ACTGTGCATT TCACCATATT
GCATTTCGTG ACCACGCCAC GAAACTCGAC ACCAGCGAAA ATCTTGAAAT CGTCTCTCTT
CTTATCGGCG ATTCCGTGTT GATTGAACTG CTTGGAAATG AGTGTGTTTC GACCCTTTTT
TCAGGACTGC AAGTCACTTC GATACCGGCG TTATCCATTA AAAAGATTCC TCTGCATATT
AACGTGCTGC TCCATTCGAG CATACCTGAT CATCTGACAG GAAATATTGC CAAACTGTAT
GCGCAGGCTA AAGTACTGGA ATATCTTTGT GCCATCATTG CATATCTGGG CTATGCTTCC
GAACGGCAGT CGCCGGAATC GGAACAACAG AAAAAAATCC GGCAGATTCA TAATGATCTT
CTTCAACTGG AAGGAAAGGT ACCTGCCCTT AATGAACTTG CGAAACAGTA TGATCTCCCG
CTCCGACTGC TGAAAGAGGG GTTCATGAAA ATATATGGCA AGTCACTTTT CAGCTACATC
TCTGAAGTAC GCCTTAACGA AGCTCACTCG ACCCTTTCAG GCACCAGCGT TCCTATGAAA
ATCATAGCGA AAAATCTTGG CTACTCGCAT GTAAACCACT TTATCAGTGC ATTCGGAAAA
CAATTTGGCT ATTCACCCGG GAGTTTGAGG AAGAAAATGC GATAA
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| Protein sequence | MELDHSGQNV EKSPHKIPKE IGYGWFQAMH LPLNMVVRKS HIQFRHEVAG RLFPALTAVE
QFTEPVLCVQ SARKGRVILS VNRNGDECII DHNNCAFHHI AFRDHATKLD TSENLEIVSL
LIGDSVLIEL LGNECVSTLF SGLQVTSIPA LSIKKIPLHI NVLLHSSIPD HLTGNIAKLY
AQAKVLEYLC AIIAYLGYAS ERQSPESEQQ KKIRQIHNDL LQLEGKVPAL NELAKQYDLP
LRLLKEGFMK IYGKSLFSYI SEVRLNEAHS TLSGTSVPMK IIAKNLGYSH VNHFISAFGK
QFGYSPGSLR KKMR
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