| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2458 |
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| Symbol | |
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| ID | 6461702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2541387 |
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| End bp | 2541671 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728637 |
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| Product | CRISPR-associated protein Cas2 |
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| Protein accession | YP_002019259 |
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| Protein GI | 194337465 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.455052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGTTTA TTCTTGTAAC CTACGATATC GAAAACGACC GGCGACGGAC GAAAATCCAT
AAACTCCTTG AAGGATATGG GTTGGCGGTG CAGTACAGCG TCTTCGAATG CTTTGTCTCT
GATGAGGAGT ACGCCAAAAT GCGCATGCGC CTGCAAAAAC TCCTCGACCC CAAACATCCG
ATCGACTCCG TTCGTTACTA CGTGCTCTGC CGGAACTGCG TCGAACGAGT CGATATCGAC
GGCAACCGCG ACTTCGCAGT TGAGAGCCCC TTTATTATTT CATGA
|
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| Protein sequence | MQFILVTYDI ENDRRRTKIH KLLEGYGLAV QYSVFECFVS DEEYAKMRMR LQKLLDPKHP
IDSVRYYVLC RNCVERVDID GNRDFAVESP FIIS
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