| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2427 |
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| Symbol | |
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| ID | 6461202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2510027 |
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| End bp | 2513161 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728610 |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_002019232 |
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| Protein GI | 194337438 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.509479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTTG ATTATAAGGG AGTTATGGTT TCGAGCACCT TCACCGACCT GAAGGAGCAT
CGTGCTGCGC TGATCAACAT TATCGATGGC GCGGGGTTTA AAGCTGTGGT GATGGAGCAT
GATTCAGCCA AGTCTGGCGT GGATGTGATC GACTCTTCGC TACAGATGGT TCGGGATAGT
GCCGTCTATA TTGGAATCAT CGCAAAGAAG CTTGGCCAGA TGCCAAAATG TCCCACTCGT
AATCCTCGTA GTGTTTCAAT CACTGAACTG GAATTCAACG AAGCGGTACG TCTCGGTCGG
CCCATTCTGT TGTTCCTCAT GGGGAATGAG CACAAAGTCA TTGAGTCCGA GTTTGAACTC
AAAGCCTTGA ATCGCAAGAA GCTGAACGCC TTCCGTGAGA GGGCAAAGAA TATGGGGCCG
GATTCGAAAG TGCATCGTGT TTATGCCGAG TTCAACAGCC TTGAGGAGTT CAGGGAAAAG
GCGGCCAAAG CGCTCTCCGA TCTGCGCCTT GCTTTTCATG CAACCCCATC GGCACCTGAA
GCAGGCAAGG AAACTTCTCA ATCCGTTGAC AAAAAACATG AAGAGTGCGC AGAGTGTTAC
CAGACTATCC TTAAAGAGGA GTTGGGTTAC ATTCGTATGC TTGGGCTTCC GGGTGTTGAG
AGCATCAAGG TCAACCTGAA CAACGACACC TTTGTGCCCT TGCGACTCTC CGACAGTTAT
GCAAGAGGTG GGCTTTTTTC AAAAGAGAGC GAGTTGCAGG GAGGTGAACA TATTCTCTAT
CCTGACGAGA TCATGAAGCA GGCCTTCCAC GACCGGAGAG GTCGCCGGAT GCTGCTCGTT
ATCGGTGACC CTGGTGCTGG CAAAACAACG CTTCTCAAGT ATTATGCCCT TTGTGCGCTT
GAGGATTTCG CGAAGCTTGG ATTCAGCGCT CCACTCAATG TATTCTACCT GCCCTTGCGT
GATCTTGTCC GCGACAAGGA GGGTCGTTGC ACTGAAAATC TGCCAGCAAC CCTTGCTGCC
TGGTCAGAAA AGCATCACCA ATCCATTGAT GCAAAGGTTT TCAATGACTG GCTGAACCAC
GGCAGCTCGC TGGTGTTGCT TGACGGTCTT GATGAAATCA GCAACATCGA AGAGCGAAAA
GAGGTGTGCC GGTGGATTGA CAACGCCTTC AGCGGCTTCA GCAAGGCCTG GTTTGTGGTG
ACATCACGGG CGACAGGGTA CCGCAAAGAT GAGGGTATTG AGCTTGCCTC AGATTATGAA
CGTGCCGATG TACAGGACTT TACCCCGGAG CAGCAGGAGC GGTTTTTACG AAACTGGTTC
ACGGCTGCAT TTCTGAAAGA GCCTTGTGAA AAAGGAGTTC ACGAGGAGTT GTGGCAGGAG
AAACAAAAAA AGGAGGCCGA AAAACGCACC ACCACCATTG TTGCGCATCT CAAGGTCGAG
AAGAACAAGG GGCTGCGCCA ACTGGCCGCC ATACCCATGA TTCTGCAGAT CATGGCTATT
TTGTGGAAGG AGAGGGAGTA CATGCCGGAA AGCCGTGTTG AACTCTACGA TGCAGCGCTC
AACTATCTGC TTGAATTCCG CGACAAACGC CGGGATATTA AACCGCTGCT CTCGGCAACT
CATGCCCGGC AGGTGCTTGG GCCGGTTTCA TTCTGGATGC AGGATACGCT CAAAAAAGAT
GAAGCGGCAA AAACAGAAAT GCACAGTGAA ATGAAGGAGT GGCTTGACAC GCTGGATACT
CCTCCAACCG CAAAAGTTTT TTGCGACTAT CTGGTCAATC GTGCAGGTTT GTTGGTCGAG
ACTGGCGGCA AGGAGTACCT CTTCCGTCAT AAATCATTCC GTGAATATCT CGCAGGAGTT
CAGCTCAAGG AAGATCGTCC CTATGAGTAT CTGAACACAC TTGTTGCGAA TTTTGGTGAT
GACTGGTGGG AGGAACCACT CCGCTTTTTT ATAGCATCAG TTGATGCCAA AGTTTTTGAT
GCCTTCATGC AAAAGCTGTT TGATTCGCCA TGGAGTGACG AGATGACACC AAAGCAGCAG
TTGTTATTGC AAACAATCAT TGAAGAGGCT AAAGGAAAAA AAATTGACGC ATTGTGCAAC
AAGCTGCTTG AACCGACTAC AACAGGCGGT CGGCAGCGGG TGATTCTTGA CTGCCTCAAA
GCTATCAATA AACCGGTAGC GCTTGATGCG TTGCAGCAGT TCCGGGAGAA AAAACTTGCC
GGAGAGAACC GGGACGTTAT CAATCGGACT GAGGAGGTGA TTCTGGCACT TGGAGGTCAA
TCGCTAACTT CAAAAGCTGA AAAGAGCATC AGCGGAAAAC CGGCATCGTT CCGAAATCCC
AATGAACAGA ATGCGGAGTA CATCCTGATA CCGGGCGGAA ACTACCGGTA TTCAGTTACA
GACGAAATCG TGGATGTGTC AGATACTTAC TTCGCCAAGT ATCCGGTAAC CAACAAGCTT
TACCGCATCT TCATTGCATG GTTGCAGGCA AAAGAGATGC CGGTTTTGTA TTCAGCATTC
ACCACTGAAC TGGATGCTAT CGCAAATGAT AACAGGTGGG GAACGGATTT TGGCGGCTAT
TACAATAACG GTAAAAGTGA TCTTGCGGCA CTCTTTCGTT CAAAGTATGA TGAAGATCGC
AAATACGATG GAGAGGATCA GCCGGTGGTT GGGGTTACCT GGTATGCTGC CAGAGCTTAT
TGCCTCTGGC TTTCCTTGCT TGAAGGTGAT AAGACATGTT ACCGTCTTCC TGATGAAATG
GCGTGGGAGT GGGCAGCGGG TGGAAAGCAA GGAACAACTG GGCAGAAAGT ACGTTCTTAT
CCGTGGTCTG AAGCGAAGGG AAAGCCCAAC TCAACACTTG CGAACTATAA TAAAAACATA
GGCACAACGA CACCGGTTGG CAACTATCCT GAAGGAGCTA CCCCGGAAGG GCTGTATGAT
ATGGCTGGCA ACGTCTGGGA GTGGATGGGC AACTGGTATG ATAAAGAAAA TGAGTGGCTA
GCTCAGCGTG GTTCGTCGTA TTATAGCAGT AATGCTGATG CTCTGCGCTG CTCCTCCCGG
CTCATCAACG ATCCGTGGAG CTGGTACGTC AGCCTTGGTT TTCGAGTGAT TCGTTCCAGT
CCTTTTTCTT CCTGA
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| Protein sequence | MPLDYKGVMV SSTFTDLKEH RAALINIIDG AGFKAVVMEH DSAKSGVDVI DSSLQMVRDS
AVYIGIIAKK LGQMPKCPTR NPRSVSITEL EFNEAVRLGR PILLFLMGNE HKVIESEFEL
KALNRKKLNA FRERAKNMGP DSKVHRVYAE FNSLEEFREK AAKALSDLRL AFHATPSAPE
AGKETSQSVD KKHEECAECY QTILKEELGY IRMLGLPGVE SIKVNLNNDT FVPLRLSDSY
ARGGLFSKES ELQGGEHILY PDEIMKQAFH DRRGRRMLLV IGDPGAGKTT LLKYYALCAL
EDFAKLGFSA PLNVFYLPLR DLVRDKEGRC TENLPATLAA WSEKHHQSID AKVFNDWLNH
GSSLVLLDGL DEISNIEERK EVCRWIDNAF SGFSKAWFVV TSRATGYRKD EGIELASDYE
RADVQDFTPE QQERFLRNWF TAAFLKEPCE KGVHEELWQE KQKKEAEKRT TTIVAHLKVE
KNKGLRQLAA IPMILQIMAI LWKEREYMPE SRVELYDAAL NYLLEFRDKR RDIKPLLSAT
HARQVLGPVS FWMQDTLKKD EAAKTEMHSE MKEWLDTLDT PPTAKVFCDY LVNRAGLLVE
TGGKEYLFRH KSFREYLAGV QLKEDRPYEY LNTLVANFGD DWWEEPLRFF IASVDAKVFD
AFMQKLFDSP WSDEMTPKQQ LLLQTIIEEA KGKKIDALCN KLLEPTTTGG RQRVILDCLK
AINKPVALDA LQQFREKKLA GENRDVINRT EEVILALGGQ SLTSKAEKSI SGKPASFRNP
NEQNAEYILI PGGNYRYSVT DEIVDVSDTY FAKYPVTNKL YRIFIAWLQA KEMPVLYSAF
TTELDAIAND NRWGTDFGGY YNNGKSDLAA LFRSKYDEDR KYDGEDQPVV GVTWYAARAY
CLWLSLLEGD KTCYRLPDEM AWEWAAGGKQ GTTGQKVRSY PWSEAKGKPN STLANYNKNI
GTTTPVGNYP EGATPEGLYD MAGNVWEWMG NWYDKENEWL AQRGSSYYSS NADALRCSSR
LINDPWSWYV SLGFRVIRSS PFSS
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