Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2385 |
Symbol | |
ID | 6460925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2470530 |
End bp | 2473214 |
Gene Length | 2685 bp |
Protein Length | 894 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642728570 |
Product | Patatin |
Protein accession | YP_002019193 |
Protein GI | 194337399 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCCTT CACCGGTTTT GGCTTCGCCA GCCTCCCCTG CCCTTGTCTA TCCCGACACT TTGAAGCTTC CCGTGCGCCG TTTTGCACTG CATCACGCCA TGAGAGCAGC AAGAAAAAGC GTCGGGCTTG CCTTGTCAGG AGGCGGCGCC AACGCTCTTT CACAGATAGG GCTCCTCAAA GCTCTTGATG AAGAGAGGGT TCCTGTTGAT TTTATTGCCG GCACAAGCAT GGGTGCCATT ATTGGAGCGC TCTACAGTTG CGGATACAGC CCGGATGAAC TTGAAACGCT TGCCCATAGC CTGAACTGGC AATCCATGGT CACGCTCCAG AAAGATTACA GCCGCTCCAA CATCTTTCTT GAACAGCAAA AAATCCGTGA CCGCGCCTCA ATCGCTATCC GCTTCGACAA GCTGAAACTT CTGATGCCCA AGTCGCTTAA TTCCGCTCAG CCGCTCACAA AAACTCTCGA CCTTCTGGTT TTAAACGCCC TTTATAAAAC GTCAGGGGAT TTCTCTACCC TTCCTGTCAA TTTCAGGGCT GTTGCGACCG ATCTGGTTTC AGGAAAACGG ATCACCCTCA CCACAGGCTC ACTCTCTGAA GCAATACGGG CAAGCAGCAC CGTTCCGATT CTCTTTGAAC CGATTCTCCG TGATGGCTAT CAACTCGTTG ATGGCGGACT CGTTGCAAAT CTTCCGGTCG ATGAACTCAA CACGGTCAAC GTGCAATACA AAGTTGCCGT CGATACACAC GGAAGCATGT ACGCAACCGG CGGAGAACTT GATCTGCCCT GGAAGGCGGC CGATCAGACG ATGACCATTC TGACCATGCA GCAATATCCT GCACAGTTGG CAAAAGCAAA CATCATCATC ACTCCTGACC TCGAGAACCA TAAGGCAACC GATTTTTCAG ATATCAAGGC TCTTGTTGAT GCCGGTTATA CCAAAGGGAA AATTTCAGCA AGCATTATCA AACGCAGTAT AGAGAACAAA ACTCCACACG GCACTGCAAT CGGGAAGTAT GCAAAAAGCC TTCTGTTTGC TGGAGAGGGC CCCGAATTCC GGGAACACTA CCTTCTTGTG TCATCCATTA TTCACCATGC AACGGATCTC AATCAGAGCC TTCAGGAACT CCTCGAAACG GATCTCTTCA CCAGCGTCTA TGCCGAACTG GACAGCCGAC GCCAGACAGT TCTCTTCCAC CTTGCACCGC TTCCGGCAAT ACGGACGGTA ACTGTCAGCG GAGGGCCCGC CGAAGCACTT GCATCCGAAG AGATCGACAC CTGCTTCAAG CCAATAGTAA ACCGACTCTA CACCAATGAG GCTGGCACAA GGGCTCTTGA AGCGCTGGTA AAAAAATACC GGGAAAAAGG GTACAGCCTT GTCACCATCA ACAGCACAGC AATAGAGAGT GGCAAACTCC AGGTAAACGT TTCATCGGGA AAAGTGGATG GTATCGACAT ACGCCGGGAC AAAAATATCA CCGGCATCAC TCCTGTAGAG CGCGAAATCA AAATCGATAC CACGCAATCG CTCAGCATCC AAAATGCCGA AGAGTCTGTC GATAATCTTT ACGACACCGG CTCCTTCAGC AATGTCTCCA TCTCAACAGA ATCACCCGCG ACATTGCATC CCGACGAGCG TACGCTCCTG AGATTTTCTC TTGAGGAAAA ACCATCGTCA GTACTTCGGC TCGGGTTGCG CTATGATGAA ACAAACAATG CCCAGTTTCT TCTTGATGTC AGAAACGAAA ATCTCGCAGG GACAACAAGC TCAATCGGTG GCTGGCTGAA AGCAGGAAGA AAGAACAACC TCGTCAACAT GGAGTTCAAT ATGCCACGCA TAGGCCCCTC CCATTTGACG ATCTCCTCAC GCCTTTTTTA TGACCAGCAT CTGTTCGAAC AGTGCAATAC CGCAGGCGAA ACAATAAATT ACGGAATCCA GAAATATGGC TTCAGTCCGG CTTTCGGTGT GAGAATCCGA AAAAACGGAC AATTTATAGC CGACATGACC CTGCAAAATG CACAATCCTA TGCTGAAAAA CATAACGACA CCCTGCTGAA GACAGCAACA ACCAACATGC TCTCTGTGGG AGCACAGTTT ACCCTTGACT CAAGAGACAA CCCACTGATT CCCTCCACGG GAAGCTATAC CAACATCAGA TATTCGATGA CTCCGATACT GCTCGACAAT CACGATATAT TCTGGCAGGT ATCGGGTAAC CACGAAGAAA ATATCCATCT CGGAAAGAAA ACGACACTGC AACTCACGGG CCTTTTCGGA CTGAGCAGCA GCAACATGCC ACTGTCAGAG AAATTCTTCC TTGGAGGGCC GGGAACAACC TACAGTCAGC GCTTCATCGG CTTGAAAGAA AACTATCTTC CCTGCAATAA CATGGCTGCT GCCGGAATGC ATCTGCGCTA CAAGCCCTCA TTCGCCATTC TCTTTCCGGC ATCACTGCTC CTGCACTACA ATGTCGGGAA TATCTGGGAA GAGCAGAACG ATATCTCCCT GGCGCACCTT ATTCATGGCT ATGGAAGCAG CATCATATGG GAAACCCCTC TTGGCCCGGC AAGATTTACG GTTTCAAAAA CGGTTCCATT TCCCGAAAAA GATCCCATTA AAGAAACAGC ATCATTACAA TTTTCAGATA CCATTTTTTA TTTCAGTATC GGTCACAACT TTTGA
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Protein sequence | MAPSPVLASP ASPALVYPDT LKLPVRRFAL HHAMRAARKS VGLALSGGGA NALSQIGLLK ALDEERVPVD FIAGTSMGAI IGALYSCGYS PDELETLAHS LNWQSMVTLQ KDYSRSNIFL EQQKIRDRAS IAIRFDKLKL LMPKSLNSAQ PLTKTLDLLV LNALYKTSGD FSTLPVNFRA VATDLVSGKR ITLTTGSLSE AIRASSTVPI LFEPILRDGY QLVDGGLVAN LPVDELNTVN VQYKVAVDTH GSMYATGGEL DLPWKAADQT MTILTMQQYP AQLAKANIII TPDLENHKAT DFSDIKALVD AGYTKGKISA SIIKRSIENK TPHGTAIGKY AKSLLFAGEG PEFREHYLLV SSIIHHATDL NQSLQELLET DLFTSVYAEL DSRRQTVLFH LAPLPAIRTV TVSGGPAEAL ASEEIDTCFK PIVNRLYTNE AGTRALEALV KKYREKGYSL VTINSTAIES GKLQVNVSSG KVDGIDIRRD KNITGITPVE REIKIDTTQS LSIQNAEESV DNLYDTGSFS NVSISTESPA TLHPDERTLL RFSLEEKPSS VLRLGLRYDE TNNAQFLLDV RNENLAGTTS SIGGWLKAGR KNNLVNMEFN MPRIGPSHLT ISSRLFYDQH LFEQCNTAGE TINYGIQKYG FSPAFGVRIR KNGQFIADMT LQNAQSYAEK HNDTLLKTAT TNMLSVGAQF TLDSRDNPLI PSTGSYTNIR YSMTPILLDN HDIFWQVSGN HEENIHLGKK TTLQLTGLFG LSSSNMPLSE KFFLGGPGTT YSQRFIGLKE NYLPCNNMAA AGMHLRYKPS FAILFPASLL LHYNVGNIWE EQNDISLAHL IHGYGSSIIW ETPLGPARFT VSKTVPFPEK DPIKETASLQ FSDTIFYFSI GHNF
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