Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2344 |
Symbol | |
ID | 6461626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2419160 |
End bp | 2422732 |
Gene Length | 3573 bp |
Protein Length | 1190 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642728532 |
Product | protein of unknown function DUF323 |
Protein accession | YP_002019155 |
Protein GI | 194337361 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTTA CCTGGCTGCA TGTTTCGGAT TTCCACTTGA GCCCTCTCGG ATCCTATGAC GTTAATCAGG TGCTTAAAGC GCTGGTTGAA TCTGTTGAAC GATTTCGGCA AACAACAGAG TGGAAACCGG ATCTGATTTT TGCTACAGGT GATATCGCAG GAAAGGGAGA TGTTGCGATT TTTAAAGGCG GTGACGATGC TCCCGCTACC AAATTTTTTG ACAAACTGCT TCAAGCTGCA GGGCAAGGCA GGGAGCGCTT GTTTATTGTT CCAGGCAACC ATGATGTTGA GCGAGATCAA GGGCTTGTTC CACCCACCTT TCAAACAGAA GTAGATATTA ATAACTACTT TGAGAAAAGT AAGCGTTATC ATTTTCTGAA GCTTCAGGCC TTTTCTGAAT GGTATAATGA TTATTTCGAG GCTGTTAAAC CTGAAAGAAC TTTTCCCGAC AAATCAACTT GTGAACTAAT TCCTTACACG CTCAGAAAAA ATGATGATGA AGTTTCGCTT AAACTGCTGC TTATCAACAG CGCCCTGTTT TGTGAAGATG CCAGTAAAGA CATTGGAAAA CTCTGTATTG GTCGTTTTTG TCTTAACCCA CTTATAGAGC AACTCGAATC GGAGAGGAAA AAAGGTGACC TCTCGCTTGT GATTGCGATG ATACATCATC CGTTTTTTGT GCTCCATACA CTCGAGAGCA TTGCACTCAA GAATGTTTTG TCCTCACAGG TTGACATTCT CTTGAATGGT CACTTGCATC AGACAGAAGT GAATTTCGGT GAACTGGTAG AGCTTGGTTC GGGGGCTGCA TACTTCAGCG CTAATAGCTC AAAAAATGCC ATGTATTGCC GGTTTGATGG CAAAAAAATA GAGGTTTATC CAATCTGCTA TTATGAAAAG AGTTCTCAAT GGTCGGATGA TCCCAACGTT TTTTACAAAA CCAAAGAGGC AACCAGAAGT TTCGAGATTC TGCGCCTGCG GAATTCCGCC GCACCAGACC CGGTCGTTAC AACTGAAACA AATGGACATC CGGAAAATAA ATATGGGACG AGTTATCAGG AATTTCTTAT AGCGGCATTG GATCACGTGC TTCCAACAGC GGTTCAAGGC TTTTCAGCAA AAGTAAGCCA AATATTTGTT TCGTTGAGTC TTTCTGATAC ATGGCAGAGT GAAGAGCGTT ATTCTCCCGA AACAAAAGTG TATGACAGGC AAAAAGAGGT AGACGGTTTT ACTGCAGAAG CCGTTATGCG TGCGGCATTT AAAAAAAATC GCCTTTTGCT TGTCATTGGT GATCCTGGTC AAGGCAAAAC AACCCTGCTC CAGCATTATG CACTCTCATG CATCGACAAA GAGCGATGTA AAGATTTTGG TTTTCCCGAA CCGGTCATGG TTTTTTATCT CCAATTACGC GACTTGAAAA AAGGAGATAC TGGTTATTCA GCACTTCCTG TCAATATTCT GGCATGGGCG CATACTGTTC CATCGTCAGA GAAAGAGAGA CCGGAAAATT TAGAAACATT GATTTTCGAA TCGCTCTGTC AAAAAAAATC ATTGGTTTTA CTTGATGGGC TCGATGAAAT CAGTGAGCTG GAAGAGAGAA AAGAGGTGTG TGAATGGATC AAGAATACCA TTACTGACTT TCCCAAAGCC TGCTTTGTTG TCACCTCACG CCCGACAGGC TACCGTCCCG TTGATGACAT TGAGATTCAA ATTCCTTTAA AGAGAGCTGA TATCCTTGAT TTCAAGCCTG TACAACAAAA AACATTTTTA CAAAACTGGT TTACTGAAGT CTTTCTCAGC AAAATTCCAA CCGACAGTGG AGACACTGAA GATCCGGAAT GGGAGAACCG TCAGAAAGAA AAAGCCCTCG ATAAAGCAAG TGCTGTTATC AAATTTTTGA ACAAGGATGA AAATAAAAGT TTACTGAAGC TGGCCGGAAT ACCGTTAATG TTGCAGATTA TGGCCATGCT CTGGAACGAG GACGATACCT TGCCGGAAAG CCGGGCTACT CTCTATAAAA AAGCACTGGA TTATCTCCTT GGTTATCAGT ACAAGCGGCG AAACATAGTC CCGAAGCTTC CCGAAGCAGA TGCCATTGGA GTTCTCGCTC CAGTTGCACT CTGGATGCAG GAGGAGCTGA AAAAGGACGA AGCCGATCAG GAAGTTATGA AGACAAGAAT GCAGAAAGAA TTAAACAAGA TACCAAAGAA GCAGAAGCCG CCAAAAGCAA AGGCATTCAG TGACGACCTG ATTGATCGTG CCGGTTTGTT GGTGAGATAT GGTCAGACTG ATTATGCCTT TCGTCACAAG TCATTCCGCG AATATCTGAC CGGTTTTCAG CTCATGAAAA ATCCTGTAAT GGATCTCTCC TTACAGAAAC TGATTGAGCA TTTCAGCGAA CCCTTTTGGG AAGAACCCAT CCGCTTCTTT TTTGGTCAGA TTGATGCAGA GAGCTTCAAT ACCTTTATGC AAAACTTCTT CGATGTAGTG AGTGAAGAGG TGATTCAGTC AAAACAAGAG CTGTTGCAAA CCATCATAGA GGAAACCCCG AAGGAAAAAA GAAAGATTGA TACGTTATGT AAAAAGCTTC TGGATTCCGA AACAACACTA CGCCGACAGC AGGTGATTCT CGACTGCCTG AAGACAATTG GGAATCCCGA AGCACTCAAT ACCCTTTATC AGTTCAGAGC AGGAAAACTT GCAAAAAACG ATGATGTAGC TGATCGAGCG GAGGAGGTGA TTCTTGCTTT CGGCGGCAAA GCGCTTGAGC GAAACATTGA AAAGAGTGTC AGCGGAAATC CTCTCTCTTT CCGGAATTCC AATGAAGAAA ACTCAGAGTA CATCCTGATA CCGGGAGGAA GCTATATTTA TTCGGTGACA GAAGAAATTG TGAGTGTGCC GGAACTCTAT GTCGCCAAGT ATCCGGTAAC AAACAAACTC TATCGCTCTT TTATTGCAGC ACTTGAGGAA TCGGTAGCAT TACAGGAAGA GCTGTTCAAA ATTGCATTAA ACAATACAGA GCATTCAACT GTTGCAAATT TTTTCAAAGA GGGTAAAAAC GACCTTGCAG CTTTGTGTCG TTCAACCTAT GATGAAGATC GAAAATTCAG CGGCGCCGAA CAGCCTGTCG TTGGTATTAC ATGGTATGCT GCTCAAGCCT ACTGTTTTTG GCTCTCACTG TGTGCAGGCA AGCCTGACTC TTATCGCTTG CCAAACGACA TCCAGCGGGA GTGGGCGGCA GGTGGAAAAC GGGAACCGAT ACCGCAGAAA GTTCGGGAGT ATCCCTGGTC AGATGAGAAG GGTGAACCAA CACCAACGTT GGCCAACTTT GGTATGAATG TTGGATATAC AACACCCGTT AACCGTTACC CCGAAGGAGC AACTCCGGAA GGTTTGTACG ATATGGCAGG TAATGTATGG GAATGGTGCA ATGATTCGGT AGGTTCGGAC CGTGTGATTC GTGGCGGGAG CTGGAACTAC GGTGCCGTGC GCTGTCGGTC GGCGTATCGG AACGGCAACA CCCCCGGTCG CCGGCGCAGC GGCGTGGGCT TCCGCCCGGT TTTCGTCCCG TAG
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Protein sequence | MALTWLHVSD FHLSPLGSYD VNQVLKALVE SVERFRQTTE WKPDLIFATG DIAGKGDVAI FKGGDDAPAT KFFDKLLQAA GQGRERLFIV PGNHDVERDQ GLVPPTFQTE VDINNYFEKS KRYHFLKLQA FSEWYNDYFE AVKPERTFPD KSTCELIPYT LRKNDDEVSL KLLLINSALF CEDASKDIGK LCIGRFCLNP LIEQLESERK KGDLSLVIAM IHHPFFVLHT LESIALKNVL SSQVDILLNG HLHQTEVNFG ELVELGSGAA YFSANSSKNA MYCRFDGKKI EVYPICYYEK SSQWSDDPNV FYKTKEATRS FEILRLRNSA APDPVVTTET NGHPENKYGT SYQEFLIAAL DHVLPTAVQG FSAKVSQIFV SLSLSDTWQS EERYSPETKV YDRQKEVDGF TAEAVMRAAF KKNRLLLVIG DPGQGKTTLL QHYALSCIDK ERCKDFGFPE PVMVFYLQLR DLKKGDTGYS ALPVNILAWA HTVPSSEKER PENLETLIFE SLCQKKSLVL LDGLDEISEL EERKEVCEWI KNTITDFPKA CFVVTSRPTG YRPVDDIEIQ IPLKRADILD FKPVQQKTFL QNWFTEVFLS KIPTDSGDTE DPEWENRQKE KALDKASAVI KFLNKDENKS LLKLAGIPLM LQIMAMLWNE DDTLPESRAT LYKKALDYLL GYQYKRRNIV PKLPEADAIG VLAPVALWMQ EELKKDEADQ EVMKTRMQKE LNKIPKKQKP PKAKAFSDDL IDRAGLLVRY GQTDYAFRHK SFREYLTGFQ LMKNPVMDLS LQKLIEHFSE PFWEEPIRFF FGQIDAESFN TFMQNFFDVV SEEVIQSKQE LLQTIIEETP KEKRKIDTLC KKLLDSETTL RRQQVILDCL KTIGNPEALN TLYQFRAGKL AKNDDVADRA EEVILAFGGK ALERNIEKSV SGNPLSFRNS NEENSEYILI PGGSYIYSVT EEIVSVPELY VAKYPVTNKL YRSFIAALEE SVALQEELFK IALNNTEHST VANFFKEGKN DLAALCRSTY DEDRKFSGAE QPVVGITWYA AQAYCFWLSL CAGKPDSYRL PNDIQREWAA GGKREPIPQK VREYPWSDEK GEPTPTLANF GMNVGYTTPV NRYPEGATPE GLYDMAGNVW EWCNDSVGSD RVIRGGSWNY GAVRCRSAYR NGNTPGRRRS GVGFRPVFVP
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