| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2241 |
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| Symbol | |
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| ID | 6461749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2327643 |
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| End bp | 2328968 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728429 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002019053 |
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| Protein GI | 194337259 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC AGCATCTTGA TTCTGCGTCA AAACTTGACG CATTGCTTGC CTTAACTGCT
GAGAGCGAGG TGGTAGAATT CAAGGAGCTT AATCTGGAAG AGATCGAACG CATCCGTGCA
CAGGCAACTC TGGAGGATTG GAGTGCGGCA ATAGTACCCG ATGCGGGGCT GGATGATCTG
GACGACGAGG CTCTCCGGGT CGCGCGTAAC AACTTCAAGA GCAAATTCCC TGATAAAGCG
GTTGACGTTG ACGCATGGGA CAATGCGACC TTTTTGAACA AGGCCAAATT ATCCATCAAA
GGAAAGTTGA CCCGTACCGC CCTGATATTG CTGGGCAACA ATGAAGCTGA ACATTTTTTG
TTGCCTGCTG ATGTCAAAAT CCGCTGGATA CTCAAAGATC ATTTGGGTAA TGACCGTGAC
TATGCCTTGT TTGGTTTGCC GATGCTGCTT GCTGTTGACA AGGTCTATGC CAAAATCCGC
AATCTGAAAT ACCGCTATCT CCCTGAAGGC ACACTCTTTC CTGAAGAGAT TGATCAATAT
GAGCCTTATG CAATTCGTGA GGCTGTAAAT AATTGCCTTG CCCATCAGGA TTATTCTCTG
GCTGGGCGTA TCAATGTGAT TGAAGGAGAC GAGACGCTGA CCTTCACCAA CCTCGGGAGT
TTTGCGCCTG GCGATGTAAA GCGCGTGGTG ATGGAAGACG CCCCGGAGGA GTATTACCGG
AACCGCTTTT TAGCGACGGC TATGTTCAAC CTGAAGATGG TGGAGACGGC AGGCGGCGGA
ATCCGGAAGT TGTTTCTGTT GCAGAGTGCC CGGTTTTTTC CGTTGCCCGA TTATGAGCTT
TCAAGCAATC GTGTAAAATT GAAACTCACT GGCAAGGTGC TGAACATGGA CTATGCCCGT
CTGCTTGCCA GCACCGGCGA CTTGACTCTC AGCGAAATCA TGGCGCTCGA CAAGGTGCAA
AAGAAGCTTT CACTCAGTAA CGATGAAGAA AAACTGCTTA AAGCAAAATT CCTTATCGAA
GGGCGCAAAC CGAATTTTTA TATCTCTCAA AAGGTGGCGC AGAAGATCGG TAAAAAAGCA
TCATACAGTA AAAACAGGGC TTTAGACAAA CAGTACTACC TTGATATGAT CTGCAGAGCG
ATTGGCGAAC ATGGTTCATT GAACCGCAAG GATATTAATG ATCTCCTTTG GAATAAACTG
CCTGATTGGA TGAGTGATAA GCAGAAGATG TATAAGATAG GCAATCTGAT GGGAGAGCTT
CGCAGGAATC AAGTGACTGT CAATAAAGGT AGCATGGCTA CTCCTCAGTG GGTTCTCGTA
AAATAG
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| Protein sequence | MNIQHLDSAS KLDALLALTA ESEVVEFKEL NLEEIERIRA QATLEDWSAA IVPDAGLDDL
DDEALRVARN NFKSKFPDKA VDVDAWDNAT FLNKAKLSIK GKLTRTALIL LGNNEAEHFL
LPADVKIRWI LKDHLGNDRD YALFGLPMLL AVDKVYAKIR NLKYRYLPEG TLFPEEIDQY
EPYAIREAVN NCLAHQDYSL AGRINVIEGD ETLTFTNLGS FAPGDVKRVV MEDAPEEYYR
NRFLATAMFN LKMVETAGGG IRKLFLLQSA RFFPLPDYEL SSNRVKLKLT GKVLNMDYAR
LLASTGDLTL SEIMALDKVQ KKLSLSNDEE KLLKAKFLIE GRKPNFYISQ KVAQKIGKKA
SYSKNRALDK QYYLDMICRA IGEHGSLNRK DINDLLWNKL PDWMSDKQKM YKIGNLMGEL
RRNQVTVNKG SMATPQWVLV K
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