| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2108 |
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| Symbol | |
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| ID | 6462735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2192424 |
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| End bp | 2193680 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642728308 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002018932 |
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| Protein GI | 194337138 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCA AGTCATTAGA GATCATTGAT CCAATCTTGC AGGCATTACA GGAAGAGGGG
TATACGACTC CGACTCCGAT ACAGGCAGAA GCTATACCGA TTATTTTACA AGGCACAGAC
TTGCTCGGAT GTGCGCAGAC AGGAACCGGA AAAACGGCTG CTTTTGCCAT TCCTATCCTG
CAATTACTGA GCGAAAACAA GGTTTATGAT AAAAAACGAA AAATTCGGAC GCTGATTGTT
ACTCCGACAA GGGAGCTCGC TATTCAGATC GGAGAGAGCT TCAACGCCTA TGGCCGACAT
ACTGGGTTGA CCAATACGGT GATTTTTGGT GGTGTTAACC AGAACCCGCA AACGGCTGCA
TTGATACGGG GTGTTGATAT CGTGATTGCT ACACCAGGGC GACTGCTCGA TCTCCTCAAC
CAGGGCTTTT TGAGTTTGCG TCATGTGGAG ATACTTGTGC TTGACGAAGC CGATCGTATG
CTCGACATGG GTTTTATCCA TGATATTAAA AAAATCTTGG CCGTGGTTCC GAAACAGAAG
CAGTCACTCT TCTTTTCTGC TACGATGCCG GCTGAAATTG TCAAGCTTGC CGCAACGATT
TTGCATAACC CTTCGAAGGT TTCGGTGACG CCGGTTTCGT CAACGGTCGA GATTATCAAT
CAATCGATCT ACTTTGTCGA TAAAGGAAAT AAAAACAGCC TGCTGGTCGA TATTTTGCGG
GATCAGGCGA TCAAAACGGC GCTGGTTTTT ACGCGCACAA AGCATGGAGC CGATAAAGTT
GTGAAAATCC TCGAGAAGCA TAACATCAAG GCAGAGGCGA TCCATGGCAA CAAGGCTCAA
AATGCCCGTC AGCGGGCGCT CTTCAATTTC AAGGCACAAA CGACGCGCGT TCTGGTGGCC
ACAGACATTG CTGCCCGTGG TATTGATGTT GATGATCTGG AGTATGTAAT CAATTTTGAA
ATGCCCAATA TTGCCGAAAC ATACGTCCAT CGTATCGGAC GAACGGGCCG GGCCGGGGCA
AAAGGAACTG CATTGTCCTT CTGTGATGCT GAAGAGAAAG AGTACCTCCG TGATATTGAA
AAGCTGATAG CCAAAAAAAT TCCTGTCATT GACGACCACT CATTCCCGTT GATGGATCAC
AATCCTGTCA AAGCGCCCAA ACAGCAGGGA AGAGGAAATT CAGGTCATCC TGCACCGAAA
CCCCTCGCAA AAAGCGCCTC CAAAAGGTGG TCAGAAAAGC CCCGAAACGG GCGATAG
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| Protein sequence | MEFKSLEIID PILQALQEEG YTTPTPIQAE AIPIILQGTD LLGCAQTGTG KTAAFAIPIL
QLLSENKVYD KKRKIRTLIV TPTRELAIQI GESFNAYGRH TGLTNTVIFG GVNQNPQTAA
LIRGVDIVIA TPGRLLDLLN QGFLSLRHVE ILVLDEADRM LDMGFIHDIK KILAVVPKQK
QSLFFSATMP AEIVKLAATI LHNPSKVSVT PVSSTVEIIN QSIYFVDKGN KNSLLVDILR
DQAIKTALVF TRTKHGADKV VKILEKHNIK AEAIHGNKAQ NARQRALFNF KAQTTRVLVA
TDIAARGIDV DDLEYVINFE MPNIAETYVH RIGRTGRAGA KGTALSFCDA EEKEYLRDIE
KLIAKKIPVI DDHSFPLMDH NPVKAPKQQG RGNSGHPAPK PLAKSASKRW SEKPRNGR
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