| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1977 |
|---|
| Symbol | |
|---|
| ID | 6463013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2059386 |
|---|
| End bp | 2060380 |
|---|
| Gene Length | 995 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642728176 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002018806 |
|---|
| Protein GI | 194337012 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.690361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAA GTTACTTTGA ATTATCTGCC ATCGATCGTG CAAAGCTACA ACAAATTGTG
GCAAAAGGAA GAGATTGGCA AGCACGTCAT CGGGCTCAAA CACTGTTATA TTTCAACGAC
GGGTTGAGTG CAAAGACCAT CGTGGCATTG CAAGACCTGA ATATCGATAC GGTTTATGAC
CGACGTAAGA ACTGGTTATC AAAGGGGTTT GCTGCTTTAT ATGACAGGCA TCGAAGCGGC
GCACCTCCGA AACTAAACGC CATTCACCTT GAACAGATCA CGATTTGGGC GGAAAAGGAA
GCACTGACAG CTCCAGCGAT AGTGGCTCGG TTAAAGGAAG AGTGCAATGT AAACGTGAGC
GTTGGTACCG CAACTAATGC GTTGAAAGCA CTTGGTTTTG TCTGGAAACG TACACGCCTG
TGGTTAAAAA AAAACGAGAT GAAGTCCGGT TTCGACAAGC ACAGTTAGAA ATAGAATTGA
TGAAAGATGA AGTCGAACGC GATGAGAGGA TCTTAGCCTT TGTAGATGAG ACTGGTTTCG
CACTGGCCCA GCCAAACCGC AGCGCCTGGA CTCCGATAGG CAAATGTCAC AAGATTGACG
CCAACCGGGG AAAACGCCTG AATGTCATCG GAGCCATGCT CTCAACGGGT GATTTGTTCT
CAGTTGCGCT GTGGCAAACA ACAGATTCAC TTATATTTAC CGGCTTTCTT GGTCTGCTGA
TGAACTACGT GGGTAAACCT TTAACGGTCA TTCTGGACAA TGCGTCATTC CATAAAGCGA
AAGCGGTTCA ACCGATGTTA AAGGTGCTGG CTCAAAAGGG GCTGACTCTT TATTTCTTGC
CACCTTACAG TCCAGAACTC AATCGAATTG AAAAGTATTG GCACAAGGTG AAGTATGAAT
TGATGGAATT CAAGACGCGA AATGAAAAAA CCCTTGAAGA AGATGTTCGA AAAATCTTAG
CTGGTTTTGG TACTGATTAC GTAATGACTT TTTGA
|
|---|
| Protein sequence | MKLSYFELSA IDRAKLQQIV AKGRDWQARH RAQTLLYFND GLSAKTIVAL QDLNIDTVYD
RRKNWLSKGF AALYDRHRSG APPKLNAIHL EQITIWAEKE ALTAPAIVAR LKEECNVNVS
VGTATNALKA LGFVWKRTRL WLKKKRDEVR FRQAQLEIEL MKDEVERDER ILAFVDETGF
ALAQPNRSAW TPIGKCHKID ANRGKRLNVI GAMLSTGDLF SVALWQTTDS LIFTGFLGLL
MNYVGKPLTV ILDNASFHKA KAVQPMLKVL AQKGLTLYFL PPYSPELNRI EKYWHKVKYE
LMEFKTRNEK TLEEDVRKIL AGFGTDYVMT F
|
|---|
| |