Gene Ppha_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1916 
Symbol 
ID6463204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2008964 
End bp2009278 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content43% 
IMG OID642728125 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002018755 
Protein GI194336961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00193475 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCT ACACATTAGA CGAAGTTCAG GATAAACTTA TTGGCAAACA TGGTACCCCG 
GAGCGGGAGA GGTTTGAGTA TGAATTACAA ATGGACTTGA TTGGGCAAGC CATCAAGCAG
ACTCGCCAGG AACGCAATTT AACCCAGGAA GCATTGGGCA AACTTATTGG TGTTCAAAAG
TCACAGATAT CAAGGATTGA AAGTAATGCG AGCAATGTTA CCATTGACAC CCTGATGCGC
GTTTTCAATG CCTTGCAGGC AAAAGTAAAA TTTCAGGTTG AGCTGCCACA CTGCAAAATC
AGTGTAGGCC AGTAA
 
Protein sequence
MKTYTLDEVQ DKLIGKHGTP ERERFEYELQ MDLIGQAIKQ TRQERNLTQE ALGKLIGVQK 
SQISRIESNA SNVTIDTLMR VFNALQAKVK FQVELPHCKI SVGQ