Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1799 |
Symbol | |
ID | 6461839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1904175 |
End bp | 1907627 |
Gene Length | 3453 bp |
Protein Length | 1150 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642728014 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002018648 |
Protein GI | 194336854 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTAA TATATACAGA CAATAACGCC GATAACTCCT ACTCTGAGCT TAAAGAGACA AGGGATGCAC TCGCTGCCAG CAATACCCAT CATCGCAACC TTATTGACTA CATGCAAAAT GGGTATGCTT ACTGCCGCGT AATATTCGAA GAAGGAGTTC CTGTTGATTT TATCCATGAG GAAGTCAATT CCGGTTATGA GAAAATGACC GGCCTGAAAA ACGTTGTTGG AAAGAGAGCG ACCGAGGTCT TTCCCGGCAT CAACAACACC TTTCCTGAAT TTATCGAGAA ACATATAACC GTAGCCCAGA CAGGAATTTC TAATCGGTTT GAATTGTATC TGGAACCATT GAGGTCATGG TTTGACCTGA CAGTTTACTG CCCTCAAAAA GGCTACTTCG TCTCTATAAT TGATGACATC ACACAACGAA AAATAGCTGA AGAGGCTCAG AAGGAGAGCG AAGAACGGTT CAGAAAACTG TTTGAGAACC ATTCAGCACC TATGTTAATC ATCGATCCCG AAACAGGCTA TATCGTTGAT GCCAATAACG CCTCTGCAAT TTTTTATGGC TGGTCAATCG ATGAACTACG CCAAATGCAT ATGCAGCAAA TCAGCACCCT GTCTCCTGAT AAAATTAAAG CAGAGATGGC GAAAAGCGTC TTGAAGACAC AAAACCAGTT TTCTTTTCGC CATCGCAAAG CTGACGGGTC ATTGCGAGAA GTCGATATTT TCAGTAATGC AATTGAAATT CATGGTAAAA TCCTTCTCTA TTCAATTATT CATGATATTT CTGAACGCAA GAGATACGAA TCACTGACCG CATTCCGTCT TCGCCTGCTT GAAATGGCAG AAACCCATTC CGCCGAAGAG TTACTGTTGG CAGCAATGGA CAAAAAGGAG GAGGATCAAT CGTTCAACAG ACTGTTTAAT GTCTTTCCTC AACCAATGCT TCTTCTTGAT CCCGATGGCG GAATCATTTT AGCTAATAAT GCATTCAAAA CTCAATTAAA CAATCACTCT GAAATAACTC CAGGCTCGAA TATTTTTGAT TCTATCTCTA TTGAACTTGC TCTTGAACAG AGGAACGTAA TTGCGGAGGT TCTTTTTACT GGCGAACGTA TCTTTTACGA AAAAGAATCT CATGGGCGTA TATACCGCCA TACTGTCTAC CCTATCCCAA ATAGCGATGG TGAAATAACA AAGCTGCTGA TGTTCATTAT GGACATTACA AACCTCATTT TAACAGAAAA AGAGCTTCTT GTTGAAAGAG TACGTTACCG GAACCTCTTC AATAATCATT TGAATGGTTT TGCTTATTGC AGAATGATAT TTAAAGATAA TTGTCCAGTA GATTTCATTC CTGAAGTGGT AAATCTGAAT TTCAAAAGAT TAACAGGATT ACAAATCATT GAGGGACAAA GTATATCTAT GCATATTCCG GGTATAAGCA TATCTAATCC GGAACTATTT GAAAAAGTTG GGCGTGTATC ACTGAATGGA ATTGCAGAAA GATTCGATTT ATATATAAAC ACATTGGATA AATGGCTTGA TATTACAGCA TACAGCCACC AGAAAGGGTA CTTTGTCATC GTGTTGACTC CCATGAAAAC CATAAATACC GGTAACTGGG AGTGGAATCT TGAAAATGGA GAGATGATAT GGTCCGATAA ATTACGGATG CTTTATGGAC TTGACTTGCA CAGTAGTAAC CCTTCCTACC AGACTTGGTT ACAAGCCATT GTTCCTATGG AAAGGATAAA TACAGAAAAG ACAATGCGGG ATGCAATTCA TAATGAAAAT ACATTTGAAA CAATATACAA TATCTGTGAT CAAAATGGCA CCGTAAGACA AATGATGACT CACGGTTTCC CTGTAAAAGA TGAAAACGGA CTTGTAAAAA GATATATGGG TGTAAGTATT GATATTACAG AATATAAAAA TGATGACACT ACCCATCTCA TCAATACACA CAATTTCACA TCTCTTTTGA ATTCTGCTGT GGAGCCACTA TGCTCTTTGG CAATCGATGG AACAATTCTT GATGCAAACA AAGATTTTCT CGATATCTAC TCATTAGAAT CAAAAAGCGT TATAGGACAA AACTTTCATT CTCTCTTTCC TCGTCAACTT CAGGAAGAAC GAAAAACAAA ATTTGAACTT ATCTTTTATA CAAGAGAACC AGTTCATTTC AAGGATCTGT TTCATTCAAA TCTTCATGAA ACAGATCGGA ATGAAGAATA TATCTATCAT ATTTCCGCAT ATCCTATTTA TGGAATCAAT GAAGATATCA ACTCTATAGC TGTCTTTATT ACAGACTCCA ACAAAAACAA TAAAGCAGAA AAATCAAGAA GACAATTAGA CAAACAATAC CAGACTCTCA TAGCAGCGTC ACCTGACAGC ATTATAACAA CTGATCTTGA TGGAATTATC AGCAGTGTCT CTGATATTGG TCTTGAAATA TTTGGAGCCA ATAATAAAGC TGATGTTATA GGCATGTCTT TTTCAAATAT TGTATACTCA GATAACATTA AAATAATCAA TGAAATATTT GATGTAACAT TACGCGAAGG TTTGATACAA AACAAAGAGA TCGTGCTAAA AAAGAAAAAC AATACCGTAT ATTCGGCAGA AATCAGTGCG GCATTAATTC AGGATTATAA TGGAGCTCCA TCATCGTATA TGATGATTAT TCGTGATATT TCACAAAGAA AAATAATTGA AAGCGAACTT TTTCATGCCA AAAGATTAAT AAGTCTTGGT GAAATGGCAT CTGGTATTGC ACATGAAATT TATCAACCGA TTAATAATAT TGGATTAATC GTTGATAAGA TTTTGATGGA TGCGTCAAAA CATAATTGGG CATGTGAAAA AGAAATTAAA ATCAAATCCG AAAAAATATT TGAAAACATA TTAAGAATTC AGACTATAAT AGATAACATC AGATCCTTTT CAAGTACAGA TAATAATTAT ATATCTTCAG TTATAAATAT CAATAAAAGC ATTCGAAACG CTCTCTTGAT GGTATCCGAG CAGTGTAAGC ACAAATCTAT AATACTTGAT TTCAAAGCTG AAGAAGAGCG ATTCTCAGTT ACTGGAAACA TTTACAAATT CGAACAGGTA ATTCTGAATT TAATCAAAAA CTCTATTGAT GCTCTTGAAG AAAAGAAACA AATCTATAAT ACGGGCTTTG AAATGAAAAT ATTTGTTAGA TCATTTTACA AAAACAATTC GATAATAGTA ACAGTAGAAG ACAATGGGAT AGGTGTAAGT GAAAGCAATA TCGAATATAT AATGCATCCA TTTTATACAA CAAAAGAATC TGGAAAAGGT ACAGGACTTG GACTTTCGAT TAGTTATGGC ATTATAAAAG AGATGAATGG CGATATTAAA ATAAAAAGTG TTCCAATGAA CGGAACATGC ATTATTATTA CTCTTCCGTC AAATAGCAAC TGA
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Protein sequence | MPVIYTDNNA DNSYSELKET RDALAASNTH HRNLIDYMQN GYAYCRVIFE EGVPVDFIHE EVNSGYEKMT GLKNVVGKRA TEVFPGINNT FPEFIEKHIT VAQTGISNRF ELYLEPLRSW FDLTVYCPQK GYFVSIIDDI TQRKIAEEAQ KESEERFRKL FENHSAPMLI IDPETGYIVD ANNASAIFYG WSIDELRQMH MQQISTLSPD KIKAEMAKSV LKTQNQFSFR HRKADGSLRE VDIFSNAIEI HGKILLYSII HDISERKRYE SLTAFRLRLL EMAETHSAEE LLLAAMDKKE EDQSFNRLFN VFPQPMLLLD PDGGIILANN AFKTQLNNHS EITPGSNIFD SISIELALEQ RNVIAEVLFT GERIFYEKES HGRIYRHTVY PIPNSDGEIT KLLMFIMDIT NLILTEKELL VERVRYRNLF NNHLNGFAYC RMIFKDNCPV DFIPEVVNLN FKRLTGLQII EGQSISMHIP GISISNPELF EKVGRVSLNG IAERFDLYIN TLDKWLDITA YSHQKGYFVI VLTPMKTINT GNWEWNLENG EMIWSDKLRM LYGLDLHSSN PSYQTWLQAI VPMERINTEK TMRDAIHNEN TFETIYNICD QNGTVRQMMT HGFPVKDENG LVKRYMGVSI DITEYKNDDT THLINTHNFT SLLNSAVEPL CSLAIDGTIL DANKDFLDIY SLESKSVIGQ NFHSLFPRQL QEERKTKFEL IFYTREPVHF KDLFHSNLHE TDRNEEYIYH ISAYPIYGIN EDINSIAVFI TDSNKNNKAE KSRRQLDKQY QTLIAASPDS IITTDLDGII SSVSDIGLEI FGANNKADVI GMSFSNIVYS DNIKIINEIF DVTLREGLIQ NKEIVLKKKN NTVYSAEISA ALIQDYNGAP SSYMMIIRDI SQRKIIESEL FHAKRLISLG EMASGIAHEI YQPINNIGLI VDKILMDASK HNWACEKEIK IKSEKIFENI LRIQTIIDNI RSFSSTDNNY ISSVININKS IRNALLMVSE QCKHKSIILD FKAEEERFSV TGNIYKFEQV ILNLIKNSID ALEEKKQIYN TGFEMKIFVR SFYKNNSIIV TVEDNGIGVS ESNIEYIMHP FYTTKESGKG TGLGLSISYG IIKEMNGDIK IKSVPMNGTC IIITLPSNSN
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