| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1788 |
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| Symbol | |
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| ID | 6461430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1888954 |
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| End bp | 1889520 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728000 |
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| Product | peptide deformylase |
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| Protein accession | YP_002018637 |
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| Protein GI | 194336843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTTAC CGATCAATAT CTATAGTGAC GATATTCTTC GATTGAAAGC AAAGCCACTG
AAGGGCGTTG ACAGTGCAAT TGAAGAGCTG ATAGCCTCCA TGTTCGAGTC AATGCGTAAT
GCTTCGGGTA TTGGTTTGGC TGCGCCCCAG GTCGGGCGGT CGATTCGATT GCTGGTGCTT
GACGTCTCAT GTGTGAGCAA GTGTGAGCAT GAAAAACCGA TGGTGGTGAT TAATCCTCAT
ATTCTTTCGG TCAGGGGCCA CAATGATATG GAAGAGGGCT GCCTGAGTGT TCCTGGTGTT
CAGGGCTATG TTGTCCGCCC GGCGGCGATT ACTCTGAAAT ATCGTGACGA GCATTTTGCA
GAGCGGACTG GTGAGTTTTC CGGTATGGTT GCCAGAGTGA TTCAGCATGA GATTGATCAT
CTTGACGGGA CTCTTTTTGT CGACAGGATG GAGAAACGAG ATCGTAAAAA GATCCAGAAA
GAGCTTACTG CTTTGGCTTC AGGAATTGTT GATACAGAGT ACCCTGTTGT TGAACGTGAA
GTTGTTCCGA TAGCAAAACC CACATGA
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| Protein sequence | MILPINIYSD DILRLKAKPL KGVDSAIEEL IASMFESMRN ASGIGLAAPQ VGRSIRLLVL
DVSCVSKCEH EKPMVVINPH ILSVRGHNDM EEGCLSVPGV QGYVVRPAAI TLKYRDEHFA
ERTGEFSGMV ARVIQHEIDH LDGTLFVDRM EKRDRKKIQK ELTALASGIV DTEYPVVERE
VVPIAKPT
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