Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1756 |
Symbol | |
ID | 6462905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1855874 |
End bp | 1857007 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642727968 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002018605 |
Protein GI | 194336811 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.185271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCA GCCTCATTAC CACCGATCCG CACAGTTCAG CCCGGTGCGG TGTTCTTGAA ACCAGCCACG GAACCATTCC TACGCCGGTT TTTATGCCGG TAGGCACCCG CGCAAGCGTG AAATCAGTTG AACCTCACGA GCTTAGGGAA CTCAACGTTC ATATCATTCT GGCCAATACC TATCACCTCT ACCTGAAACC GGGAAACGAG ATCCTGCAGA AAGCCGGGGG TGTCCACCGC TTCATGAACT GGGATGGCCC GCTTCTGACC GACAGCGGTG GCTATCAGGT CTACTCACTC TCCGACCTGC GCAAAATCAG CGAAGAGGGA GTCCTGTTCA AATCACACCT TGACGGTTCA AAACAGCACT TCACCCCTGA AAATGTGATT GAGACCGAGC GCATCATCGG CAGCGACATC ATGATGCCTC TCGATGAATG TCCACCCTCC ACCGCAGAAA AAGAGTATGT ACGCATCTCC GGAGAGCTGA CCATTCGCTG GGCCGAACGG GCAAGAAAGC ATTTCACACT CACCTCTCCC CTCTACGGCC ACGAGCAGTA CCTCTTCGGC ATTACGCAAG GGGGAATCCA TACCGACCTG CGCACCAGCT CTACCAATGC GCTGGTTGAT CTTGATTTTG ACGGTTATGC CATTGGCGGC ATGGCAGTCG GAGAACCGGC TGAAGAGATG TACCGTATCC TTGAGCTCTC TCACCCGCTG CTGCCGGAGA AGAAACCGCG CTACCTCATG GGAGTCGGCA CACCTGAAAA CATTTTAAAC GCTATCGAAC GCGGCATCGA TATGTTCGAC TGCGTCATCC CGACACGCGA AGGGCGCAAT GGCAGGGTCT ATACCCGCCA GGGCAAGATG AACCTTCGCT CGGCAAAATA TTCAACCGAC TTCAGCTCCA TCGACGAAGG ATTCGACAAC GAAGTCTGCC GAAACTATTC ACGCGCCTAC CTCCGCCACC TGCTGAACGT CGGCGAGATT CTCGGTCTGA AACTCTGCAC CCTGCAAAAC ATCTCCTTTT TCATGTGGCT TACCGCAACA GCACGAACGG AGATCCAGAA AGGCTCCTTC ATGGAGTGGA AACAAGATTT TCTTGAACGA TTCAACTACA ATGACAACGC ATAA
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Protein sequence | MKFSLITTDP HSSARCGVLE TSHGTIPTPV FMPVGTRASV KSVEPHELRE LNVHIILANT YHLYLKPGNE ILQKAGGVHR FMNWDGPLLT DSGGYQVYSL SDLRKISEEG VLFKSHLDGS KQHFTPENVI ETERIIGSDI MMPLDECPPS TAEKEYVRIS GELTIRWAER ARKHFTLTSP LYGHEQYLFG ITQGGIHTDL RTSSTNALVD LDFDGYAIGG MAVGEPAEEM YRILELSHPL LPEKKPRYLM GVGTPENILN AIERGIDMFD CVIPTREGRN GRVYTRQGKM NLRSAKYSTD FSSIDEGFDN EVCRNYSRAY LRHLLNVGEI LGLKLCTLQN ISFFMWLTAT ARTEIQKGSF MEWKQDFLER FNYNDNA
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