Gene Ppha_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1743 
Symbol 
ID6462931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1844582 
End bp1845016 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content44% 
IMG OID642727956 
Productprotein of unknown function DUF1130 
Protein accessionYP_002018593 
Protein GI194336799 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT TTACCATCGG CTTTACACAG AAAAGCGCAG AGCAATTTTT CAACCATTTG 
AAGCAGCCTG GTTTGACAAG AGTTATTGAT ATTCGGCTTA ACAATGTTTC TCAATTAGCC
GGATTTACGA AGATGAAAGA CTTGCAGTTT TTCCTCCGTG AAATCAATAA CCTTGATTAC
GTTCACCTGC CAGAATTGGC GCCGACCAAA GAGATTCTTG ATGGCTACAA GAAAAATGGC
GGCGATTGGA AGAGTTATGA AAAGCAATTC TTGTCATTGA TGGCGACACG TCGCGTTGAG
AATCTTGTCA AAAAAGATCT GATTGATGGC GGCTGCCTTC TCTGCAGCGA GGTCACACCT
GAGCACTGCC ATCGACGGCT GGTCGCCGAA TATTTCCGTG ACAAATGGGG CTATGTGGAA
ATTGTTCATT TGTAG
 
Protein sequence
MKIFTIGFTQ KSAEQFFNHL KQPGLTRVID IRLNNVSQLA GFTKMKDLQF FLREINNLDY 
VHLPELAPTK EILDGYKKNG GDWKSYEKQF LSLMATRRVE NLVKKDLIDG GCLLCSEVTP
EHCHRRLVAE YFRDKWGYVE IVHL