| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1657 |
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| Symbol | |
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| ID | 6463143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1754304 |
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| End bp | 1756523 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642727874 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_002018511 |
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| Protein GI | 194336717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA TTGATCACTC CTCTGCTGGT GCGCTTCAAA ATGAGAATTT TTGGAGATAT
TACGCTCATT CAAGACCAAG CGAACCTTCC GAGAACTGGC ATCTATTAGA AGATCATTTG
CAAGCGGTTG CTGAAATGGC TGCTGGATTT GCTCGTTTTT TTGGTGCAGA AAATTGGGCA
GATATTGCAG GACGTTGGCA TGATTTAGGA AAAGGTACAC TATCTTGGCA AGCATATTTG
CGTCATGAAA ATAATGTTAC GGATGAATTT TCTGCGTTTT ATAGTGGGCA TCCTGTCCAT
GCAATTGTAG GTGCTCAAGA ACTTTATAAG CAATCTGATC AAGCAGGAAA ATTACTTGCT
TACTGTATTG CTGGGCATCA TGGCGGTTTG CCGAACTGGC ATGATGACGC AATTGCTGCG
TTAAAATCTC GATTGATGGA AGATTTTACT GATGTTGATT TTCCGCATTC TGCTCCAAAA
CTGCCTTCAT TATTACCGCT TTCCAAAATC GAGCAGAATC GTTTAGGGTT TATTATTCAG
TTTTTTGTGA GGATGTTATT TTCTTGTCTC GTTGATGCCG ACTATTTGGA CACTGAAGCA
TCATTGAGTA ACAAAAAATC TGTCTGGCGG TCGGGGTATC CTGCTCTGGA TGAACTCTCT
GAACGATTTT CAACAAACTT CGATGCCCTG AGAAACAAAG CTGATTCGAC AACGGTTGTA
AACCAGTACC GCGAAAAGGT GTTGAATGAT TGTTTGAAAA GTGCAGAGTT TGATCCAGGA
CTTTTTTCTT TGACAGTACC GACAGGAGGC GGAAAAACAT TAGCATCGCT TGCCTTTGCA
TTGGCTCATG CTAAAAAATA TGGTAAGCGA AGAATCATAT ATGTGATTCC ATTCACAAGC
ATCATTGAGC AGAACGCCCA AGTATTCAGG GATATGCTAG GCGATGATGC CATACTTGAG
CATCATTGCA ACTTTATGGT TGATGAATCA GACTGGAAAT CTCTCTTGGC CTCAGAAAAC
TGGGATGCCC CGATTATTGT GACAACAAAC GTACAGTTCT TTAATTCATT TTATGCTAGC
AAAACATCAT ACTGTCGAAA GTTACACAAC GTAGCGGATA GTATTGTCAT ATTTGATGAG
GTTCAAGCAA TTCCTGTTGA AAAATTGTCC CCCTGCATGG AGGTGATTAA AGAGCTTTCA
CTCAACTATG GTGTCTCATC AATTCTTTGT ACGGCAACAC AACCTGCTAT CGAATATTCG
GAACAGTTTC AAAGTGGGTT ACAGGGTGTA CGAGAAATTA TTCAGGATGT GCATAGTCTG
TTTGGAGCAT TAAAGCGGAC TGAAGAGTCT TTTATTGGAG AACTCTCGGT ACAGGATGTT
GCAACAAAAC TATCCAATTA TGAACAGGTT TTATGTATAG TCAACACTCG TCAACAGGCA
TTGGATATAT ATAATGCTTT GCCAAAATCA GATGGAACTA TTCATTTAAG CGCCTTGATG
TATCCTCTTC ATCGTACCAA TAAACTGAAT GAAATTCGCA GGAGATTACA CGACGGAGAG
CCATGCCGCG TTGTTAGTAC ACAATTGATT GAGGCTGGAG TAGATGTGGA CTTCCCTTGT
GTATTCAGAG TTGTTGCAGG GATTGATAGT ATTGCTCAAG CCGCTGGGCG GTGTAATAGA
AATGGTTTAC ATGAAAAAGC CTGTCAAGTA TTTGTTTTTT CTTTTGCTGA TTTACCGATC
ACTCCATTTA TAAAACAAGC AGCTCAATCG GCGGAAAAAT TGTTTGATCT TTTTAAAGGA
AAACTCACAT CACCGGAATG TGTTCGTGAG TATTTTTATG ACTATTTTTG GAAAAACCAG
CAACGTATGG ATTCAGAAGG AATCGTTTCT CTGTGTCAAA CAGCTCAATC AGGAGAAATT
CAATTTAAGA AGCTTGCTGA TTTCGAAATA ATAAATTCAG CAACAATTCC AGTTATTATA
GCACTTGATC AAAATTCACT AACAATGGTT GAAGAGTTAA AATATTCAAA ATATAAAGGA
CGAATTTTAC GAAAACTCCA AAAATACACA GTACAAATAC ACAGTAATCA AATTAAGGAA
ATACAAAAAT CTCTTGAAGT GATAGTCCCG GGTATTTTTG TCTTGATATC AGATGTGTTG
TATTCAAGTA ACACTGGTTT AAAATGTTCG ACGCCACAAG GGAATGCATT TATTCATTAA
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| Protein sequence | MSKIDHSSAG ALQNENFWRY YAHSRPSEPS ENWHLLEDHL QAVAEMAAGF ARFFGAENWA
DIAGRWHDLG KGTLSWQAYL RHENNVTDEF SAFYSGHPVH AIVGAQELYK QSDQAGKLLA
YCIAGHHGGL PNWHDDAIAA LKSRLMEDFT DVDFPHSAPK LPSLLPLSKI EQNRLGFIIQ
FFVRMLFSCL VDADYLDTEA SLSNKKSVWR SGYPALDELS ERFSTNFDAL RNKADSTTVV
NQYREKVLND CLKSAEFDPG LFSLTVPTGG GKTLASLAFA LAHAKKYGKR RIIYVIPFTS
IIEQNAQVFR DMLGDDAILE HHCNFMVDES DWKSLLASEN WDAPIIVTTN VQFFNSFYAS
KTSYCRKLHN VADSIVIFDE VQAIPVEKLS PCMEVIKELS LNYGVSSILC TATQPAIEYS
EQFQSGLQGV REIIQDVHSL FGALKRTEES FIGELSVQDV ATKLSNYEQV LCIVNTRQQA
LDIYNALPKS DGTIHLSALM YPLHRTNKLN EIRRRLHDGE PCRVVSTQLI EAGVDVDFPC
VFRVVAGIDS IAQAAGRCNR NGLHEKACQV FVFSFADLPI TPFIKQAAQS AEKLFDLFKG
KLTSPECVRE YFYDYFWKNQ QRMDSEGIVS LCQTAQSGEI QFKKLADFEI INSATIPVII
ALDQNSLTMV EELKYSKYKG RILRKLQKYT VQIHSNQIKE IQKSLEVIVP GIFVLISDVL
YSSNTGLKCS TPQGNAFIH
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