Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1637 |
Symbol | |
ID | 6463198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1724861 |
End bp | 1726096 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642727853 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002018491 |
Protein GI | 194336697 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACTGC GTGAAACCGT CATCCAGGCG CTTTATTCCC TGGCTGTCAA CAAACTCCGC TCATGGTTGA CCATCATGGG TGTCGCTGTA GGCGTATTCT CCATCATTGC CGTCATGACA GCCCTTGATG CCATCGACAA AAGTGTGGAA TCAGGGCTGA CAAGCCTCGG AGCCAACACC TTCCAGATAC AGAAAAATCC TGCAACTGTT TTTGGTGGAG GCCATAGCCG CAATGTGCTT GCCAACCGTA AAGATATCAC TTATAAGCAG GCGCAGCTTT TCAGAAAAAA CATGGCTTCA GAAGCCAGAA CAATCGGCTT CATCATTTAT AGTCCGGCCA ATCAGGCAAA ATATGCCAAC CTGGCCACCA ATCCTGATGT CACCATGCAG GGTGCTGACG AAAACTTCTC ACTCTCAAAC GGCTACACCA TAGCAACAGG CCGTAACCTT TCAGAGAACG ATATCCGATC AGCAAGAAAC ACCGCTGTAC TTGGAGGTGA AGTTGCGGCA ACACTTTTCC CAACTGGCGA AAACCCGCTG AACAAGTTTA TCAAAGTTAA CGGGGAGATC TACACAATAA TTGGAGTTTT CGAAAAAAAA GGAGCCGCAT TCGGCCAGAG TCAGGATAAC TTTGTGCTCA TCCCCATTAC CCGTTACCTC GACCATATCA ATGAAAAAAG CAGTTTGAGC ATCACCGTTG AAGCCCTGTC ACGCAAAGAG TATCAGTTGA CAATTGACCG GGCAATTGGT GCAATGAGAC TTGCGAGAGG ACTGACCGTC AAGGATGCCA ACGATTTCGA AATCAGAACA AATGAATCCC TGATCGACTC GTTCAAAGAC ATCAAGCTTG CCATTGGCAC AGGCGCCTTC ATCATCAGCT TTATGGCCCT GCTCACCGCA GGAGTAGGTA TCATGAACAT CATGCTGGTC AGCGTCACCG AAAGAACACG GGAGATAGGA ATCAGAAAAT CGGTCGGAGC TCCTCGCCGT ACCATCCTCC GCCAGTTCCT GCTCGAATCA TTCTTCCTCT CTCTCGCTGG CGGAGTAATT GGCGTTCTTG CAGGCATCAT CGCTGGCAAC GCTGTTGCGT GGAAATTCAA TCTCCCTCCT ATATTTCCTT GGGTATGGAT AACCGTCTCC ATGCTTGTCT GTTCGGGTAT CGGAATGGCA TTCGGACTTT TCCCGGCATG GAAAGCGGCA AATCTCAACC CCGTAGAAGC TCTGAGGCCA AAGTAA
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Protein sequence | MLLRETVIQA LYSLAVNKLR SWLTIMGVAV GVFSIIAVMT ALDAIDKSVE SGLTSLGANT FQIQKNPATV FGGGHSRNVL ANRKDITYKQ AQLFRKNMAS EARTIGFIIY SPANQAKYAN LATNPDVTMQ GADENFSLSN GYTIATGRNL SENDIRSARN TAVLGGEVAA TLFPTGENPL NKFIKVNGEI YTIIGVFEKK GAAFGQSQDN FVLIPITRYL DHINEKSSLS ITVEALSRKE YQLTIDRAIG AMRLARGLTV KDANDFEIRT NESLIDSFKD IKLAIGTGAF IISFMALLTA GVGIMNIMLV SVTERTREIG IRKSVGAPRR TILRQFLLES FFLSLAGGVI GVLAGIIAGN AVAWKFNLPP IFPWVWITVS MLVCSGIGMA FGLFPAWKAA NLNPVEALRP K
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