Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1611 |
Symbol | |
ID | 6463261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1697435 |
End bp | 1698088 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727826 |
Product | dTMP kinase |
Protein accession | YP_002018466 |
Protein GI | 194336672 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGATAA CCTTTGAAGG AATCGATGGC GCAGGCAAAT CAACCCAGAT AAAAGAGCTT GTCCATGCCC TTGGCCTCCA GGGAATTGAG GCTGTTGTTT TGAGAGAACC TGGCGGCACC ACCGTAGCCG AAAAAATTCG TCAGATCCTG CTTGAAAGCT CTCATGGAAT TACCCCGGTG GGTGAGCTGC TTCTTTTTTC AGCATCGAGG GCGGAACTGG TTCAGGAGGT TATCCGGCCA GCCCTTGCCA GTGGAAAAAC AATTATTCTT GACCGTTTTT TTGACTCTAC GACCGCCTAT CAGGGATATG GCCGTGGTAT CGACATGGAG TTGCTCCGCT CCATCATCGC AATTTCGACC TGCGGCATTA CTCCTGATAT CACCTTCTAT CTTGATCTGG AGCCTGAAGA GGCTCTGAAG AGAAAATATT CAAAAACCTC TATCCCTCTG GCTTTTGAGG GCGAGGAGCT TGACCGTATG GAGCGTTCGG GTCTTGAATT TTACCGCAAT GTACGGCGTG GCTACCTCGA CATTAAACAA CTCGAAAACC GGCGTTTTGT CCAATTAAAC GCTCTTGACC CAGTAGCGGT CATTCACGGC AAGATCCTTG CTCTTCTCGG GGAGCGCTTT CCCTCCTTTC TGAACCCTGT ATGA
|
Protein sequence | MLITFEGIDG AGKSTQIKEL VHALGLQGIE AVVLREPGGT TVAEKIRQIL LESSHGITPV GELLLFSASR AELVQEVIRP ALASGKTIIL DRFFDSTTAY QGYGRGIDME LLRSIIAIST CGITPDITFY LDLEPEEALK RKYSKTSIPL AFEGEELDRM ERSGLEFYRN VRRGYLDIKQ LENRRFVQLN ALDPVAVIHG KILALLGERF PSFLNPV
|
| |