| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1588 |
|---|
| Symbol | |
|---|
| ID | 6463306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1682309 |
|---|
| End bp | 1682725 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642727808 |
|---|
| Product | protein of unknown function DUF86 |
|---|
| Protein accession | YP_002018448 |
|---|
| Protein GI | 194336654 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2445] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.181939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGT CGTTAATTGA ACAGAAGCTT GAGTCTTTGC GCCGCTCAAT CCAAAGGGTT
AAAGAGAAAT GCCCAAAAAA TGCCGCTGCA CTGGGTTCCG ATTACGATGC TCAGGATATT
CTCTCCCTCA ACCTCACCCG AGCTGTTCAG ATGTGTGTGG ATATTGGAAC ACACCTTGTT
GCTCGCAGTG AGTATCCCCC TCCTGCTACC ATGGGAAAAA CGTTTGATAT TTTATGTGAA
TCCGGAATAA TCACTGCTGA TTTAGCCAAT CGCCTGAAAA AAGCGGTAGG ATTTCGTAAC
CTCGCGGTTC ATAACTATGA GTCCATCAAT TGGGCAATCG TTTTTGCTAT TGCCACAGCA
CACCTTCAGG ATTTTGAAGA GTTTGCCAAA GCAGTTGTAC GTCTGAACGA TAAGTAA
|
|---|
| Protein sequence | MDWSLIEQKL ESLRRSIQRV KEKCPKNAAA LGSDYDAQDI LSLNLTRAVQ MCVDIGTHLV
ARSEYPPPAT MGKTFDILCE SGIITADLAN RLKKAVGFRN LAVHNYESIN WAIVFAIATA
HLQDFEEFAK AVVRLNDK
|
|---|
| |