| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1579 |
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| Symbol | |
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| ID | 6463327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1670659 |
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| End bp | 1672248 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727800 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_002018440 |
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| Protein GI | 194336646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA TAAAGGAAAC CGCACGAAGG AAAACATTTG CCATCATCAG CCATCCTGAT
GCCGGGAAAA CAACACTGAC AGAAAAATTT CTGCTCTTCG GTGGCGCCAT TCAGACCGCT
GGCGCCGTAA AAAGCAACAA GATCCGCAAG ACTGCAACCA GCGACTTCAT GGAGATCGAA
AAGCAGCGCG GAATATCCGT AGCTACATCG GTCATGGGGT TTGAATATGG CGGAAAACGG
GTCAATATTC TCGATACACC CGGCCACAAA GACTTTGCTG AAGACACCTA TCGAACACTG
ACCGCTGTCG ACAGTGTTAT TCTTGTCGTG GATTGCGTCA AAGGGGTTGA GGAACAGACA
GAAAAACTGA TGGAGGTGTG CCGGATGCGC CAGACTCCGG TCATCATCTT TATCAACAAG
ATGGATCGTG AAGGGCGCAA CCCTTTTGAA CTGCTCGACG AACTTGAACA CAAGCTGCAA
ATCAGTGTCC GGCCGCTGAC CTGGCCAATC AGCCAGGGCC AGACCTTTAA AGGCGTTTAC
AATCTCTACA AAAAAGAGCT GAACCTTTTT GATGCCAATA CTACCCGCAT CAGCGAAAGC
AATATTCGGG TCAATGACCT GAACGACCCT GAACTGGAGA AATGGATCCC TGAAAGTTTC
TGCAAAAAAC TCCGGGAAGA TGTTGCCCTG ATTGAGGGAG TCTATGAACC ATTTCACAAG
GAGACCTACC GCTCCGGCCT GCTCGCTCCG GTCTTTTTCG GCAGCGCCAT CAACAACTTC
GGCGTCAGGG AGCTCCTCGA AACATTCCTT GCCGTCGCGC CAAGCCCCGA TGAGCGGGAG
GCAACCGAGC GCATCGTCAA AGCCTCAGAA GAGGCAATGA GCGGCTTTGT CTTTAAAATC
CACGCCAATC TCGACCCCAA CCACCGCGAC CGCACCGCCT TTTTCCGGAT CTGTTCCGGC
AGTTTCGAGC GCAACAAATT CTACTACCAC ACCCGGCTGA AGAAAAAAAT ACGTTTTTCA
AGCCCGACCC AGTTCATGGC CAACGAAAAA AGTGTGGTGG ATGAATCCTG GCCAGGCGAC
GTCATCGGCC TCTACGACAA CGGCTCCCTG AAAATCGGCG ACTCGCTGAC CGAGGGTGAA
GAGCTGCACT TCCGTGGAAT CCCAAGCTTT TCGCCTGAAA TCTTCAAGGC GCTTGAAAAC
CGCGACCCGA TGAAGGCCAA ACAGCTCGAC AAAGGGGTGC GCCAGCTCAC CGAAGAGGGT
GTTGCACAGC TTTTCATCCA GCACGGCGCC CGCAAAATTA TCGGCACGGT TGGAGAGTTG
CAGTTCGACG TCATCAAGTT CCGTCTGGAA CATGAATATG GCGCCCAGTG CGACTTCACT
CCCCTGCGCT TCAAAAAGGC ATTCTGGGTT ACCAGTGCCA ACAAGGAGAT GCTCGAAGAG
TTTCTTCGCC GCAAATGGAA CGCCATCGCA CACGACAAGG AAGATCATCC TGTATTCTTC
GCCGAGAGCG AATGGATGAT GAAAACTGCC AGGGAGGATT ATCCCGAACT TGAGTTCCAC
ACCACGTCGG AGTTCAAGAC CGAGGGGTAA
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| Protein sequence | MDLIKETARR KTFAIISHPD AGKTTLTEKF LLFGGAIQTA GAVKSNKIRK TATSDFMEIE
KQRGISVATS VMGFEYGGKR VNILDTPGHK DFAEDTYRTL TAVDSVILVV DCVKGVEEQT
EKLMEVCRMR QTPVIIFINK MDREGRNPFE LLDELEHKLQ ISVRPLTWPI SQGQTFKGVY
NLYKKELNLF DANTTRISES NIRVNDLNDP ELEKWIPESF CKKLREDVAL IEGVYEPFHK
ETYRSGLLAP VFFGSAINNF GVRELLETFL AVAPSPDERE ATERIVKASE EAMSGFVFKI
HANLDPNHRD RTAFFRICSG SFERNKFYYH TRLKKKIRFS SPTQFMANEK SVVDESWPGD
VIGLYDNGSL KIGDSLTEGE ELHFRGIPSF SPEIFKALEN RDPMKAKQLD KGVRQLTEEG
VAQLFIQHGA RKIIGTVGEL QFDVIKFRLE HEYGAQCDFT PLRFKKAFWV TSANKEMLEE
FLRRKWNAIA HDKEDHPVFF AESEWMMKTA REDYPELEFH TTSEFKTEG
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