| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1511 |
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| Symbol | |
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| ID | 6463479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1590221 |
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| End bp | 1592659 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727738 |
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| Product | primosomal protein N' |
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| Protein accession | YP_002018378 |
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| Protein GI | 194336584 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTAC TGACAGGCGC AGACAAATTA TTCCAGGGAG AACCTTTTGT TGCTACCGTT
TCCGATTCTC TGAAACAGGA CATCCTGCCC GGATGTATGG TTCTGCTTTC AGCAAAAAAG
GGAAACGGAC GAGTTGCGAT CGGCTACATT CTGGCTCTCA TGCCCTTCGA AAGTGAAGAG
GTGCCCACCA TTGAGATCCT GGACGTACTC CATGGCGGAC GTCCAGTCCT GAACCCGGCT
CTGATGCAAC TTACCGAATG GATGGCCGAT TATTATCTCA CAAGAAGAAT CGACACCCTG
ATGGCCGCCC TGCCCGCAGC AGTCCGTACA ACGGTTCATG ATGTCGTTGA AATCAAACAT
TTTACGCTTA ATGCCGAAGC GCCAAAAGTC ATCAATACGG CACTTCGGCG TGCCATCATG
CAATTGATGA TTCGGGAAAA ACGACTTACT GTTCATCAAC TGCAGCAGCG CATCGGCAGG
AAACAACTTT ATCGCACCCT TTCAGAACTT GAGCGGGGCG GGCACCTGCA GCTCACAAAA
AGGTTTTCAT CCACAAAAGC CAAACAAAAG AGCTGTTATC GGCTGAGTCT ATCCTTACCG
GAAAACGCAG AAGAGAGCCT GAAAAACTCC CCGAAACAGC TTGAAGCCAT CAAAATTCTG
GCCTCTTTCG GCAACACCTT TGCTTTTGCA GAAACCATTG GCAGCTCAAG GGAGACGCTC
AATGCCCTTG TAAAAAAAGG GTTTGTTGAA AAATCACAAA TGGCTGTCAC AAGCCACTTC
ACGACAGGCT TTTCGGAAAC TCCACAATCC ACAAAAACAC CAACGGCTTC ACAGCAAAAA
GCTCTTGAGC AACTGACTCA TGCTGTTACC CAGGAGGAAT ACAAGACCTT CCTGCTTCAC
GGAGTGACCG GAAGCGGAAA AACCCTGATC TATATCGAAC TGCTGAAAAA AGTTCTTGCA
GCAGGAAAAA CGGCTATTGT GCTGGTACCT GAAATAGCCC TGACCCCCCA GACTGCAGGC
CGATTTCGTG AACATTTTCA TGATGACATC ACCATTCTGC ACAGCGCCAT GAGCAACCAG
GAAAAATATG ATGCCTGGCA TAGTCTTCGC CTCGGAAAAA CAAAAATTGC CCTTGGCGCC
CGCTCAACCA TCTTCGCTCC ACTTGAAAAC CTCGGAGCAA TCATTGTTGA CGAAGAGCAT
GACAGCGCAT ACAAGCAGGA TCGTAATCCC CGCTACCATG CTCGCGATAC AGCAATCATG
AGGGCAATGT TCAGCAAGGC GATCTGCGTA CTCGGATCAG CGACACCCTC GTTCGAATCC
TATAACAACG CAGTCAAGGG CAAGTACACC CTTATCAATC TCCCGGAACG AGTTGATGGA
GCAACCATGC CCGCCATCAC GCTTGTCTGG ATGAAAGGCA GTCCCAAAGC TTCAGCATCC
ATTTCAGAAC TCCTTTACAG TCAGATTGCA CTTCGTCTTG AAAAAAATGA ACAGGTCATT
CTTCTGCAAA ACAGAAGAGG ATTTGCCGGC AGCATCTTCT GTCTTGCCTG TGGTCATATC
CCTCTTTGCC CCTTCTGCAA TATCCCACTG GTCTACCATG CGACCCCGAA ACAGCTTCGC
TGCCACTATT GCGGTCACGC CATTCACTTC ACGGAATCGT GCATGAAGTG TTCATCGTCT
AATCTGTTTT ATAAAAGCAG TGGCACCGAA CGCATTGAAG AAGAGCTGCA AACCCTCTTC
CCTGAAGAAA AAATTCTCCG CATGGATGTC GACACCACCT CCGCAAAAGG CTCTCATGGC
AGAATTCTTA AAGAATTTCA CGACCGCAAA GCCCGTATTC TGCTGGGTAC GCAAATGGTT
GCAAAAGGGC TTGATTTTCC GGCAGTCACT CTTGTCGGGG TTCTGATGGC TGATATCGGA
CTGAATATTC CGGACTTTCG GGCTTCAGAG AGGACATTTT CCCTGCTCAC CCAGGTGGCC
GGACGTGCAG GACGCTCTTC CCTGCCGGGT GAAGTCTATT TCCAGGTTTA TAACATGGAA
AACGATGTTT TTACCGCTCT TTTGCAGAAA GAGAGGAGCT ATGAAAAGTT TTTTCTGCAG
GAAAGCGCTC TAAGAAAGGA GCTTCACTAC CCTCCTGCAT CCCGACTCAT AAAATTCGAA
TGCAGTGCAG AAGAAGAAAA TCAGGCTGAA GCGGCGGCGC TCTATTGCAA AAAAAGTCTT
GAATTGCAAC TACCAGCAGA AAAAGGTAGG GTTCTTGGGC CGGCACCTGC CGGTATTGCA
AAAATAAGAG GCCGGTATCG CTACCATATC CTCGTCAAAC TCTTCGACGG CAAACTCTCA
CCACCATTCA TCAAGCAGAT GAGCGACGAC ATCATCGCCC GCTTCCGCTC CTCAGGAGTG
CTGTTCAGTA TTGATGTCGA TCCCCAGAAT CTCATGTAG
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| Protein sequence | MQVLTGADKL FQGEPFVATV SDSLKQDILP GCMVLLSAKK GNGRVAIGYI LALMPFESEE
VPTIEILDVL HGGRPVLNPA LMQLTEWMAD YYLTRRIDTL MAALPAAVRT TVHDVVEIKH
FTLNAEAPKV INTALRRAIM QLMIREKRLT VHQLQQRIGR KQLYRTLSEL ERGGHLQLTK
RFSSTKAKQK SCYRLSLSLP ENAEESLKNS PKQLEAIKIL ASFGNTFAFA ETIGSSRETL
NALVKKGFVE KSQMAVTSHF TTGFSETPQS TKTPTASQQK ALEQLTHAVT QEEYKTFLLH
GVTGSGKTLI YIELLKKVLA AGKTAIVLVP EIALTPQTAG RFREHFHDDI TILHSAMSNQ
EKYDAWHSLR LGKTKIALGA RSTIFAPLEN LGAIIVDEEH DSAYKQDRNP RYHARDTAIM
RAMFSKAICV LGSATPSFES YNNAVKGKYT LINLPERVDG ATMPAITLVW MKGSPKASAS
ISELLYSQIA LRLEKNEQVI LLQNRRGFAG SIFCLACGHI PLCPFCNIPL VYHATPKQLR
CHYCGHAIHF TESCMKCSSS NLFYKSSGTE RIEEELQTLF PEEKILRMDV DTTSAKGSHG
RILKEFHDRK ARILLGTQMV AKGLDFPAVT LVGVLMADIG LNIPDFRASE RTFSLLTQVA
GRAGRSSLPG EVYFQVYNME NDVFTALLQK ERSYEKFFLQ ESALRKELHY PPASRLIKFE
CSAEEENQAE AAALYCKKSL ELQLPAEKGR VLGPAPAGIA KIRGRYRYHI LVKLFDGKLS
PPFIKQMSDD IIARFRSSGV LFSIDVDPQN LM
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