| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1458 |
|---|
| Symbol | |
|---|
| ID | 6463549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1531323 |
|---|
| End bp | 1531877 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642727687 |
|---|
| Product | PEBP family protein |
|---|
| Protein accession | YP_002018328 |
|---|
| Protein GI | 194336534 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0354948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGAA AATTGTTTTT AGTCGTTGTC GCTCTTTGTT GTACCTCGAC GGTAGCACTT
GCCGGTAACT TTAGGCTCAC AAGCCCAACG ATTCAATCCG GAGCCACCCT CACCGAGGAA
CAAGTATTTG ATGGCTTTGG CTGTACGGGG AAAAATCAAT CACCAGCGCT GAAATGGACA
GCAGGGCCGA ATGGAACAAA AAGCTATGCC GTTACCGTGT ATGATCCTGA TGCTCCTACA
GGCTCAGGCT GGTGGCATTG GGTTGTCTAC AATATCCCGG CAAGTGTGAC CGAATTGGCT
TATGGTGCCG GGGATGCAAC AGGGACGCTT CTGCCTCCAG GAACTCTTCA AGGTCGTACA
GATTTTGGTA CCCATACATT CGGCGGTGCA TGTCCACCAA AAGGCGATAA GCCCCATCGT
TACATTTTTA CCGTCTATGC CTTGAAAATT GAAAAAATTG ATGCTCCTGC CGAAGCCTCC
GCAGCATTGA TCGGCTTCAT GATTCATGCC AATACCCTTG CAAAAGCGAG CTTTACAGCC
AAATATGGTC GCTGA
|
|---|
| Protein sequence | MFRKLFLVVV ALCCTSTVAL AGNFRLTSPT IQSGATLTEE QVFDGFGCTG KNQSPALKWT
AGPNGTKSYA VTVYDPDAPT GSGWWHWVVY NIPASVTELA YGAGDATGTL LPPGTLQGRT
DFGTHTFGGA CPPKGDKPHR YIFTVYALKI EKIDAPAEAS AALIGFMIHA NTLAKASFTA
KYGR
|
|---|
| |