| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1439 |
|---|
| Symbol | |
|---|
| ID | 6463574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1516053 |
|---|
| End bp | 1516493 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642727671 |
|---|
| Product | protein of unknown function DUF307 |
|---|
| Protein accession | YP_002018312 |
|---|
| Protein GI | 194336518 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3304] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00732681 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC TTGGCAATAT TCTGTGGCAC TTCCCGTTTT TCGGTTTCGT CAGTGCTATT
CTTGTCTATC TGTTAGGGCT TATTTTTACA GTGACGATCG TTGCAGCACC AATTGGCCTG
GGGTTAATGG AGTACGGGAA ATTTCTGTTC GCCCCATTCG GGCATGCGAT GATCAGCAAA
TCTGATCTCA ACGTTAAACA AAATCCGGTA TGGATGGCAT ACTCAACCAT TGTGATGATT
ATCTACCTTC CCCTCGGCCT CATTCTTGCG CTAATCGCGG TTTGTCAAGT AGCCGCGCAG
TTCGTGACAA TTATCAATAT TCCTGTTGCA CTTGTTATTG CCAAGTCTCT CGGGACCTAT
CTGAACCCGG TCAACAAGAT ATGTGTGCAC AGTGCAGTGG TGGAAGAAAT AGAACGTCGT
AAAGCGAAAG CCGAAGTATG A
|
|---|
| Protein sequence | MKTLGNILWH FPFFGFVSAI LVYLLGLIFT VTIVAAPIGL GLMEYGKFLF APFGHAMISK
SDLNVKQNPV WMAYSTIVMI IYLPLGLILA LIAVCQVAAQ FVTIINIPVA LVIAKSLGTY
LNPVNKICVH SAVVEEIERR KAKAEV
|
|---|
| |