Gene Ppha_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1405 
Symbol 
ID6463610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1465140 
End bp1465532 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content43% 
IMG OID642727644 
Producthypothetical protein 
Protein accessionYP_002018285 
Protein GI194336491 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.923263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACG CTACATTGAT GCTTCGCCAG ATTCATCCAA GCTTTATCAA GCAAGGTCAG 
ATAACTTCCC AGGCATTCCG CCCTACAATC AAGGATGATA AAAAGCTTTC CGTATACGAT
AACGATATGA TTACTGCGAA GAAAGCTTAC GAGCACTATA CCAAAAAGCT GTTCCATGAC
ATGGCCAAAG ACCTTGTTGA GGTCGGAGCA ATGGATGAAG TAACGATGCG TACAGTAGAA
TCGCTTTGTT TGCCGGAAAA AAAGGTTTTT CTCCCGGAGG ACATCCGTCG CATTCGGACA
ACAAACCATC TCAGCCAGCC TGTTTTTGCT TTGATTTCAG CTTTTATTTT GCATCAAGCT
GGACTTAATC GAACAGACTT CCTCGATCTA TAA
 
Protein sequence
MNDATLMLRQ IHPSFIKQGQ ITSQAFRPTI KDDKKLSVYD NDMITAKKAY EHYTKKLFHD 
MAKDLVEVGA MDEVTMRTVE SLCLPEKKVF LPEDIRRIRT TNHLSQPVFA LISAFILHQA
GLNRTDFLDL