Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1405 |
Symbol | |
ID | 6463610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1465140 |
End bp | 1465532 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642727644 |
Product | hypothetical protein |
Protein accession | YP_002018285 |
Protein GI | 194336491 |
COG category | [K] Transcription |
COG ID | [COG2944] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.923263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACG CTACATTGAT GCTTCGCCAG ATTCATCCAA GCTTTATCAA GCAAGGTCAG ATAACTTCCC AGGCATTCCG CCCTACAATC AAGGATGATA AAAAGCTTTC CGTATACGAT AACGATATGA TTACTGCGAA GAAAGCTTAC GAGCACTATA CCAAAAAGCT GTTCCATGAC ATGGCCAAAG ACCTTGTTGA GGTCGGAGCA ATGGATGAAG TAACGATGCG TACAGTAGAA TCGCTTTGTT TGCCGGAAAA AAAGGTTTTT CTCCCGGAGG ACATCCGTCG CATTCGGACA ACAAACCATC TCAGCCAGCC TGTTTTTGCT TTGATTTCAG CTTTTATTTT GCATCAAGCT GGACTTAATC GAACAGACTT CCTCGATCTA TAA
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Protein sequence | MNDATLMLRQ IHPSFIKQGQ ITSQAFRPTI KDDKKLSVYD NDMITAKKAY EHYTKKLFHD MAKDLVEVGA MDEVTMRTVE SLCLPEKKVF LPEDIRRIRT TNHLSQPVFA LISAFILHQA GLNRTDFLDL
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