| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1311 |
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| Symbol | secA |
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| ID | 6461979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1375394 |
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| End bp | 1378468 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727552 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_002018193 |
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| Protein GI | 194336399 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA TTTTTGAAAA GATCTTCGGC TCCAAACACG AAAAGGATAT CAAAAAAATC
CGCCCTCTCG TCAGCAGCAT CAACGAACTG CAGATGACCA TGGCGTCGCT GAGTAACGAT
CAGTTGAGAG AGAGAGGGGT AACGCTGAAA CAGAGGGTAC GAAAAACTCT TGAGCCACTT
GAGCAGGAGA AAACATCGCT CTCCCGGAAG CTCGATAACC CGGATATCAA CCTTGAAGAG
GCTGAAACAA TCAACACACG CCTTGATACC CTTGCTGAAG AGTACGAACA GGCTACCGCA
GCCATACTTG AAGAGCTTCT TCCTGAAACC TTCGCCCTTG TCAAAGAGAG CTGTGTGCGC
CTTAAAGGAC ACACCTACCT GGTCATGGGA AGAGAGATGA TCTGGGACAT GGTACCCTAC
GATGTTCAGC TCATTGGAGG AATTGTGCTC CATTCGGGAA AAATCTCCGA AATGGCAACT
GGTGAAGGAA AAACCCTTGT GTCAACACTC CCTGTTTTTC TTAATGCCCT GACAGGAAGA
GGCGTACATG TCGTCACGGT CAATGATTAC CTTGCACAGA GGGACAAGGA GTGGATGAGC
CCGGTCTTTG CCTTTCATAA CCTCTCGGTA GGCGTTATTC TCAACACGAT GAGGCCCGAA
GAGCGAAGGG AACAGTACGC TTGTGATATA ACCTATGGTA CAAACAATGA ATTCGGCTTC
GACTATCTGC GCGACAATAT GGCCAGCACC CCTGAAGAGA TGGTGCAGCG GAACTTCTAC
TACGCCATCG TTGATGAGGT TGATAGTGTA CTGATTGATG AAGCCAGAAC GCCACTGATC
ATTTCAGGCC CCGTCCCCAA TGCCGACAAC AGCAAATTCC AGGAGATCAA ACCATGGATC
GAGCAGTTGG TTCGTGCACA GCAGCAACTC GTCGCCAAAT ATCTCGGTGA AGCTGAAAAA
CTCATTAAAA CCAAACCGGG CGATCCTGAA GCAGGTCTTG CACTCCTTCG CGTCAAACGT
GGACAGCCAA AAAACACCCG CTACATTAAA ATGCTCTCAC AGCAGGGTAT GGCAAAACTG
GTACAGGGTA CTGAAAACGA ATACCTTAAA GACAATTCAA GCCGGATGCA GGAGGTCGAT
GACGAACTCT ATTTCGCCGT TGATGAAAAA GCGAACACCA TTGATCTGAC CGACAAGGGT
CGCGACTTCC TCAGCAAGCT CAGCCACCAG GACAGCGATA TTTTTATGTT GCCCGATGTC
GGCTCAGAAG TCGCCATCAT TGAAAGTGAC GCATTGATCC CGGTAGCCGA TAAAATTCAG
AAAAAAGATG AGGTATACCG CCTTTTTGCT GACCGTTCAG AACGGCTGCA TAACATCAGT
CAACTCCTGA AAGCCTACTC ACTCTTCGAG CGCGACGATG AATATGTAGT CCAAAACGGA
CAGGTTATGA TTGTCGACGA GTTTACCGGA CGAATCCTTC CCGGTCGTCG ATACAGCGAT
GGACTGCACC AGGCGATCGA GGCAAAAGAG AATGTCAAGA TCGAGGGTGA AACGCAGACC
ATGGCAACCA TCACCATCCA GAATTTTTTC CGACTCTACA AAAAGCTCGC CGGTATGACC
GGCACAGCGG AAACCGAAGC TTCAGAGTTT TATGAAATCT ACAAGCTCGA TGTCGTCGTT
ATTCCGACCA ATGCCTCCAT TGTTCGCAAG GACATGGACG ATTTGGTCTA TAAAACCCGC
CGCGAAAAAT ATAATGCCGT TGTTCTGAAG GTTGAAGAGC TGCAGAAAAA GGGGCAGCCA
GTACTTGTCG GTACAACCAG TGTTGAGGTT TCGGAAACCC TTTCACGCAT GCTTCGCGCA
AGAAAAATCG TTCACAATGT ACTCAACGCA CGGCAAAATG ATCGTGAAGC GGAAATTGTT
GCCGAAGCGG GCCAGAAAAA TGCAGTAACC ATTGCTACCA ACATGGCTGG ACGTGGAACC
GATATCAAAC TCGGTAGTGG CGTCCGCGAA TTGGGCGGAC TCTTCATTCT TGGTTCCGAA
CGTCACGAGT CCCGTCGTAT CGACCGCCAG CTCCGTGGAC GTGCCGGACG ACAGGGTGAT
CCGGGTGAGT CGGTTTTCTT TGTCTCTCTC GAAGATGAGC TGATGCGCCT GTTCGGCTCC
GATCGGGTTA TCTCCGTTAT GGATCGTCTG GGTCATGAAG AGGGAGATGT CATTGAGCAC
TCCATGATCA CCAAATCAAT CGAGCGTGCA CAGAAAAAGG TTGAAGAGCA AAACTTTTCG
ATCCGCAAAC GTCTGCTTGA ATATGATGAT GTCCTTAACC AGCAGCGTGA GGTTATCTAT
TCACGCCGCC GCAACGGCCT TATCAAGGAT CGCCTGACCA GTGATATCCT TGACCTGCTC
AGGGATTACA GCGAGCTGGT CATTAAAAAG CACCACAAGA TGCTTGATGT TGATGCTATT
GAGGAACAGT TGATGCGCGA ACTCTCCATT GAATTCAAGC CTGAACGCAA TACCTTTGAG
CGCGAAGGGA TTGAGGCTAC CGCCGAAAAG CTCTACCAGA CCGCCCTTGC GTTCTATCGC
AGAAAAGAGG CTGCAATGCC CGAAGAGATC ATGCAGCAAA TTGAAAAATA TGCCGTTCTC
AGTGTCATAG ACCTCCGCTG GCGAGAGCAC CTCCGCGAAA TCGACTCCTT GCGTGAGGGA
ATCAATTTAC GCGCTTATGG CCAGAAAGAT CCCCTGCTCG AATACAAGCA GGAGGCATTC
CGTCTTTTTA TTGATCTCTT GCACGACATC GAGCTCGAAA CCCTCTCTCT TGCCTTCAAG
CTCTTTCCTG TTAACCCTGA TGAGGCGCGT GAAATGGAAG AGCGCCAGCG AAAAGCGGCT
GTCAGACAGG AAAAACTCAT CGCACAGCAT AAAGCGGCAG AAAGTGTTTA CACCGCATCT
TCTGATGAAC CTGAAACAAA CCAGGAAGAG AGTCCGCAGC AGCCCGCCAT AGCCGAAAAA
AAACCTGGCC GCAATGACCT CTGCCCTTGC GGAAGCGGAA AAAAATATAA AAACTGTCAC
GGACAGCAAC CCTGA
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| Protein sequence | MLKIFEKIFG SKHEKDIKKI RPLVSSINEL QMTMASLSND QLRERGVTLK QRVRKTLEPL
EQEKTSLSRK LDNPDINLEE AETINTRLDT LAEEYEQATA AILEELLPET FALVKESCVR
LKGHTYLVMG REMIWDMVPY DVQLIGGIVL HSGKISEMAT GEGKTLVSTL PVFLNALTGR
GVHVVTVNDY LAQRDKEWMS PVFAFHNLSV GVILNTMRPE ERREQYACDI TYGTNNEFGF
DYLRDNMAST PEEMVQRNFY YAIVDEVDSV LIDEARTPLI ISGPVPNADN SKFQEIKPWI
EQLVRAQQQL VAKYLGEAEK LIKTKPGDPE AGLALLRVKR GQPKNTRYIK MLSQQGMAKL
VQGTENEYLK DNSSRMQEVD DELYFAVDEK ANTIDLTDKG RDFLSKLSHQ DSDIFMLPDV
GSEVAIIESD ALIPVADKIQ KKDEVYRLFA DRSERLHNIS QLLKAYSLFE RDDEYVVQNG
QVMIVDEFTG RILPGRRYSD GLHQAIEAKE NVKIEGETQT MATITIQNFF RLYKKLAGMT
GTAETEASEF YEIYKLDVVV IPTNASIVRK DMDDLVYKTR REKYNAVVLK VEELQKKGQP
VLVGTTSVEV SETLSRMLRA RKIVHNVLNA RQNDREAEIV AEAGQKNAVT IATNMAGRGT
DIKLGSGVRE LGGLFILGSE RHESRRIDRQ LRGRAGRQGD PGESVFFVSL EDELMRLFGS
DRVISVMDRL GHEEGDVIEH SMITKSIERA QKKVEEQNFS IRKRLLEYDD VLNQQREVIY
SRRRNGLIKD RLTSDILDLL RDYSELVIKK HHKMLDVDAI EEQLMRELSI EFKPERNTFE
REGIEATAEK LYQTALAFYR RKEAAMPEEI MQQIEKYAVL SVIDLRWREH LREIDSLREG
INLRAYGQKD PLLEYKQEAF RLFIDLLHDI ELETLSLAFK LFPVNPDEAR EMEERQRKAA
VRQEKLIAQH KAAESVYTAS SDEPETNQEE SPQQPAIAEK KPGRNDLCPC GSGKKYKNCH
GQQP
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