Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1193 |
Symbol | |
ID | 6462983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1243586 |
End bp | 1244794 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727441 |
Product | aminotransferase class I and II |
Protein accession | YP_002018083 |
Protein GI | 194336289 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0161082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAA CAGTTATTCC GGAAGAACAA TATCTCACCC GCAGGGTGCT CAGCATGCAG GAATCGCAGA CCATGCGAAT CAGCAATCTG GCCAATAAAA TGAAAGCTGA AGGTCGTGAT ATCGTCAGTC TTTCAGCCGG TGAGCCGGAT TTCCCTACCC CAGCCCACGT CAACCAGGCT GGTATCGATG CCATTAATGC CGGGTTTACC CGTTATACAG CAAATTCAGG TATTGCTGAT TTGAAAAAGG CCATTGTAGA AAAGTTCAGA CGCGATAATG GTCTGGAGTT TCAGGAAAAT CAGATTATCG TCAGCAATGG AGGAAAGCAG ACTCTTGCAA ACACCTTTCT TGCTCTTTGC GAAGAGGGTG ATGAGGTGAT TGTTCCGGCA CCTTACTGGG TCAGTTTTCC TGAAATGGTT CGTCTTGCAG GCGGCATTCC AGTGATTATT CACACGACTC TGGAAGAGGA ATACAAAATG ACACCCGCTC AGCTTGATGC GGCCATTACC CCAAAAACGA AGATCGTTGT GTTGAATTCT CCTTCGAATC CAACAGGGGC AGTTTATACA GAAGCTGAAG TACGAGCCTT GATGAAAGTT GTTGAAGGAC GTGGTATTTT TGTCGTTTCC GACGAAATGT ACGATATGAT CGTCTATGGT GATGTTCGTC CCTTCTCTCC AGCAAGGATT CCGGAGATGA AAGAGTGGGT CATTGTGAGT AACGGAGTAT CGAAAACCTA TGCCATGACG GGATGGAGAA TTGGTTACCT TGCAGGCCCC AAATGGCTTA TCGATGCCTG TGACAAGATA CAGTCGCAGA CCACCTCAAA TCCTAATGCT ATAGCCCAGA AAGCTGCCGT TGCGGCCCTT ACAGGAGATC AGGGAATTGT TGAAGAGCGT CGAGCAGAGT TTGAAAAGAG GCGCGATTAT ATGTATGAGG CTCTCAATAG TATACCTGGA TTCAAGACGG CTCTTCCTCA GGGTGCGTTT TATATTTTTC CCGATATCAG TGGTTTGCTC GGTCAGACAT TTGATGGCGT TGTTATGAAA GACTCGGCAG ATGTTGCCGA ATATCTCCTG AAGGTCCATC ACGTTGCAAC TGTACCGGGG GATGCGTTCG GCGCACCGGA AAACCTTCGC ATGTCCTATG CTGCGTCGAT TGCTTCACTG GAAGAGGCGA TAAATCGTAT CAGGAGAGCT TTTAAATAG
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Protein sequence | MSKTVIPEEQ YLTRRVLSMQ ESQTMRISNL ANKMKAEGRD IVSLSAGEPD FPTPAHVNQA GIDAINAGFT RYTANSGIAD LKKAIVEKFR RDNGLEFQEN QIIVSNGGKQ TLANTFLALC EEGDEVIVPA PYWVSFPEMV RLAGGIPVII HTTLEEEYKM TPAQLDAAIT PKTKIVVLNS PSNPTGAVYT EAEVRALMKV VEGRGIFVVS DEMYDMIVYG DVRPFSPARI PEMKEWVIVS NGVSKTYAMT GWRIGYLAGP KWLIDACDKI QSQTTSNPNA IAQKAAVAAL TGDQGIVEER RAEFEKRRDY MYEALNSIPG FKTALPQGAF YIFPDISGLL GQTFDGVVMK DSADVAEYLL KVHHVATVPG DAFGAPENLR MSYAASIASL EEAINRIRRA FK
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