| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1130 |
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| Symbol | |
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| ID | 6462667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1171304 |
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| End bp | 1174279 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642727376 |
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| Product | type III restriction system endonuclease |
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| Protein accession | YP_002018026 |
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| Protein GI | 194336232 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTGC ACTTTGAACC GAACCTTGAC TATCAACTAC AGGCGGTTGA AGCGGTCTGC
GACCTCTTTC GCGGGCAGGA GATCTGCCGC ACGGAGTTTA CCGTTACCAT GCCGACCACG
AAAGACATGC AGTTTCCTGG CATGGAGAGT GATCTTGGCA TTGGCAACCG GCTTACGTTG
CTTGATGATG ACCTGCTCAA AAGCCTGCAT GATATTCAGC TCCGCAACGG CCTGCCGCCT
TCCGGAACCC TTGCTTCCGG CGACTTCACG GTAGAGATGG AGACCGGAAC GGGCAAAACC
TACGTCTATC TGCGTACCAT CTTTGAACTC AACAAGCGGT ACGGCTTTAC CAAGTTTGTG
ATTGTCGTCC CGTCAGTGGC TATCAAGGAG GGGGTTTACA AAACCCTTCA GATTACCGAA
GATCACTTCA AGGGGCTCTA TGCCGGAGTA CCTTTTGAAT ATTTCCTCTA TGACTCCTCA
AAACTGGGGC AGGTGCGTAA TTTTGCCACC AGCTCGCAAA TCCAGATTAT GGTGATGACG
GTTGGCGCCA TCAACAAAAA GGATGTCAAT AATATTTACG GTAAGGGTGC CAATGAGTCT
ACTGGCGGGG AAAAGCCGAT TGATCTTGTC AAGGCGGTGC GGCCCATCCT GATTATTGAT
GAACCGCAAA GTGTGGATGG TGGTCTTTCC GGTGCTGGCA AAACCGCGCT CGATGCCATG
AGCCCGCTTT GTACCTTGCG TTATTCCGCT ACGCATGTGG ACAAGCACCA GATGGTTTAT
CGTCTTGATG CGGTTGATGC GCACGATAAG GGGCTGGTGA AGCAGATTGA GATTGCTGCC
GCTACGGTGG AAGATGCCTT CAACAAGCCT TATGTTCGTC TCTTGAAGGT TGAGAACAAG
CGGGGCAGGA TTTCCGCACT CGTTGAACTC GACAAGATGA CGGCCAGCGG TGTCAGGCGA
AAAGAGAGTG TTGTGGTTGA TGGTGATAAT CTTGAAATGG TTACCGGACG GGCGATCTAT
GCTGATTGCT CTATCGGTGA AATTCGTGTT GAAAAGGGCA AGGAGTTTAT GGAGTTGCGC
TTCCCCGGTG GTGAGCAGTT CCTGAAACCT GGCGAGGCGT ATGGAGATGT GGATGCTCTT
GCCGTTCAGC GCCAGATGAT TCGCCGTACC ATCAAGGAGC ACCTCGACAA GGAGCTGCGT
CTGCGCCCGC AGGGTATCAA AGTGCTTTCG CTCTTCTTTA TTGATGAGGT TGCCAAATAC
CGCTCTTACG ACAGTGACGG TAACTCAGTG AAGGGCGATT ATGCCCGCAT TTTCGAGGAG
GAGTACCGCC GGGCGGCAAA GCTGCCTGAT TATTTTACAC TGTTCAGTGA GGTTGACCTG
ACGCATGCCC CCGAAGAGGT GCATAACGGC TATTTCTCGA TCGACAAAAA AGGTGGCTGG
ACCAATACCG AGGAGAACAA TCAGGGCAAT CGTGAAAGTG CTGAACGGGC CTACAACCTG
ATCATGAAGG AGAAAGAGAA GCTGCTCTCA CTGGAGACAC CACTGAAATT CATCTTTTCT
CACTCTGCAC TCAAGGAGGG GTGGGACAAC CCCAATGTCT TCCAGATTTG TGCACTGCGT
GAAATGGGCT CAGAGCGTGA ACGCCGCCAG ACGATAGGGC GTGGTCTGCG GTTATGCGTC
AATCAGCACG GTCTGCGACT GCGTGGATTT GAAGTCAATA CGCTGACGGT TATTGCAACG
GAGAGTTATG AGCAGTTTGC CGAAAATCTT CAGAGAGAGA TTGAGGCTGA AACCGGTATT
CGATTCGGGA TTGTCGAAGA ACACCAGTTT GCGGCGATTT CCGTTACTAC TGACGAAGGA
GTCTCAGTTC CTCTTGGATT CGAGCAGTCG AAGCTCTTGT GGGAGCATCT GAAAGAGCAG
AACTATATCG ACAGTAAGGG CAAGGTGCAG GATTCGCTGA AAAGTGCGCT CAAGGAGGGG
ACTCTTCTTG TGCCGGAGCA ATTCAGGCCA CAGCTTGATC AGATTACCGC TGTACTGAAA
AAGCTTGCAG GACGTCTGGA AATCAAGAAT GCGAATGAGC GGAGACAGGT ACACACCCGG
CAGGCAGTGC TGCACAGTCC GGAATTCAAA GAGCTTTGGG AGCGTATCAA GCATAAAACG
ACCTATCGGG TGGAGTTCGA CAATGAAAAG CTGGTGGAGA GCTGCATCAA GGCATTACAG
AATGCTCCCG CCATTTTGAA GACACGCATG CAGTGGCACA AGGCTGAAAT CGTTATTGGT
AAATCGGGCG TTGAAGCTAC TGAACGGAGT GGTGCCGCAA CGGTTGTGCT TGATGAAAAC
GATATTGAGT TGCCTGACCT TCTTACGGAT CTGCAGGATC GTACCCGGCT GACCCGCCGC
ACGATTCATC GTATTTTGAT CGGAAGTGAG CGACTCGACG ATTTTAAGCG TAACCCGCAA
CAGTTCATTG AGCTGGCAGC CGAAGCCATC AAGCGGTGCA AGCAACTCGC TGTTGTGGAT
GGCATCAAGT ATCACCGCCT TGGTGACGAA CATTTTTACG CCCAGGAGCT TTTTGAGCAA
CAGGAACTTA CTGGTTACCT CAAGAACCTT ATCCCGGTTC AGAAATCAGT CTATGAGCAG
GTGGTCTATG ACTCCGATCC CGAAGCAACT TTTGCTGATC AGTTGGAGAA GAATCTGGCC
ATCAAGGTCT ATGCAAAGCT TCCGGGATGG TTCAGGATTC CAACACCACT CGATACCTAC
AATCCCGACT GGGCGGTACT CGTCGAAAAG GATGGCGAAG AGCGAATCTA CTTTGTTGTC
GAGACCAAGA GCAGCCTGTT TACCGATGAC CTGCGTGACA AGGAGAGTGC AAAGATTGAG
TGCGGCAAAG CTCACTTCAA GGCGCTCAGT ATTTGCGAAA CCCCCGCAAG GTATGTTGTG
GCCCGCTCTT TGGATGACGT GCTGAACAGG GTTTAA
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| Protein sequence | MKLHFEPNLD YQLQAVEAVC DLFRGQEICR TEFTVTMPTT KDMQFPGMES DLGIGNRLTL
LDDDLLKSLH DIQLRNGLPP SGTLASGDFT VEMETGTGKT YVYLRTIFEL NKRYGFTKFV
IVVPSVAIKE GVYKTLQITE DHFKGLYAGV PFEYFLYDSS KLGQVRNFAT SSQIQIMVMT
VGAINKKDVN NIYGKGANES TGGEKPIDLV KAVRPILIID EPQSVDGGLS GAGKTALDAM
SPLCTLRYSA THVDKHQMVY RLDAVDAHDK GLVKQIEIAA ATVEDAFNKP YVRLLKVENK
RGRISALVEL DKMTASGVRR KESVVVDGDN LEMVTGRAIY ADCSIGEIRV EKGKEFMELR
FPGGEQFLKP GEAYGDVDAL AVQRQMIRRT IKEHLDKELR LRPQGIKVLS LFFIDEVAKY
RSYDSDGNSV KGDYARIFEE EYRRAAKLPD YFTLFSEVDL THAPEEVHNG YFSIDKKGGW
TNTEENNQGN RESAERAYNL IMKEKEKLLS LETPLKFIFS HSALKEGWDN PNVFQICALR
EMGSERERRQ TIGRGLRLCV NQHGLRLRGF EVNTLTVIAT ESYEQFAENL QREIEAETGI
RFGIVEEHQF AAISVTTDEG VSVPLGFEQS KLLWEHLKEQ NYIDSKGKVQ DSLKSALKEG
TLLVPEQFRP QLDQITAVLK KLAGRLEIKN ANERRQVHTR QAVLHSPEFK ELWERIKHKT
TYRVEFDNEK LVESCIKALQ NAPAILKTRM QWHKAEIVIG KSGVEATERS GAATVVLDEN
DIELPDLLTD LQDRTRLTRR TIHRILIGSE RLDDFKRNPQ QFIELAAEAI KRCKQLAVVD
GIKYHRLGDE HFYAQELFEQ QELTGYLKNL IPVQKSVYEQ VVYDSDPEAT FADQLEKNLA
IKVYAKLPGW FRIPTPLDTY NPDWAVLVEK DGEERIYFVV ETKSSLFTDD LRDKESAKIE
CGKAHFKALS ICETPARYVV ARSLDDVLNR V
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