Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1105 |
Symbol | |
ID | 6462761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1136946 |
End bp | 1137665 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727351 |
Product | Curli production assembly/transport component CsgG |
Protein accession | YP_002018001 |
Protein GI | 194336207 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000129155 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATTA AATTTTTTCT GATGTTTTTG TTTCTTTTTT CAATCTCTGT TTTTTCTCAA GGATTCGCCG AAGAGAAACC TCGTCTTGGG GTATTGAGAT TCACAAACCA CACCTCTGCA GGATGGTGGG AAGGGAGTGT GGGAACGGAT CTGCAGGATA TGCTCATTGC AGAACTGGCA TCGACGAACA GTTTTCGAGT ACTCGAAAGG AGAGAACTTG ACGCTGTTCT CAATGAACAG GATCTGGGTG ATTCCGGAAG GGTAAATCCC AGAACAAGGG CACGATTAGG GAAAATTACC GGTGCCAAGT ATCTGGTCGC TGCTACACTT TCAGCCTTTG AACAGAACAC AAGCGGTGGC GGAGGGGGAC TCTCTTTTGG TGGTATCAGT TTGGGAGGCA GGCAGGACAA GGCCTATATG GCTGTCGACC TTAAAGTGAT TGATGTTGAA ACAGGCGAAA TCTATGATGC CCGGACTGTA GAGGCCACAT CAAAATCCAG TGGTATCAGC GTAGGTGTAC ACCGTGGAGG CTTTGGCGGT AACCTTGGCC AGTATCAGAA TACTCCTGTA GGGAAAGCAA TCAGGGCTTG TATCATGGAA ATAGTCGAGT ACCTGGAGTG CTCTCTGGTA GAAGGAAAGG ATAGTGGTTG CATGGACGAG TATAGATCGA AGGAAAGATC CAGAAGAGAA AAGACCAAAG GTTCAATTCA ACTAGATTAA
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Protein sequence | MRIKFFLMFL FLFSISVFSQ GFAEEKPRLG VLRFTNHTSA GWWEGSVGTD LQDMLIAELA STNSFRVLER RELDAVLNEQ DLGDSGRVNP RTRARLGKIT GAKYLVAATL SAFEQNTSGG GGGLSFGGIS LGGRQDKAYM AVDLKVIDVE TGEIYDARTV EATSKSSGIS VGVHRGGFGG NLGQYQNTPV GKAIRACIME IVEYLECSLV EGKDSGCMDE YRSKERSRRE KTKGSIQLD
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