| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1096 |
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| Symbol | |
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| ID | 6463100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1128686 |
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| End bp | 1128943 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727342 |
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| Product | virulence associated protein B |
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| Protein accession | YP_002017992 |
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| Protein GI | 194336198 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4456] Virulence-associated protein and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATACTG CACGCATTTT GCCATCCGGG CAGAGCCAGG CTATCCGATT GCCCAAGGAG
TACCGGTTTA AGGGCACCGA TGTTCTTATC AAACATTTCG GTAATGGAGT TTTACTGTTG
CCGATTGATA AGTCATGGGC AATGCTTGAC ACTGCTCTGG AGGAGTTTGA GCCAGGGTTT
CAATTGCAGC GAGAGGAGCC TGAAGAGCAG ATTCGCGAGG AGATACCAAT ATCTGCATCT
ACATCATCAA ACCATTGA
|
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| Protein sequence | MDTARILPSG QSQAIRLPKE YRFKGTDVLI KHFGNGVLLL PIDKSWAMLD TALEEFEPGF
QLQREEPEEQ IREEIPISAS TSSNH
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