Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1083 |
Symbol | |
ID | 6463792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1113757 |
End bp | 1115202 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642727329 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_002017979 |
Protein GI | 194336185 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000273538 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAGACA AGATAACTTC AAGAAGCGAA GACTATTCCC AGTGGTATAT TGACCTTGTG CGCTCGGCAA AACTGGCCGA TTATGCCGAT GTCAGGGGAT GCATGGACAT ACGGCCAAAT GGCTACGCCA TCTGGGAAAA AATGCAGGCC GCCCTCGACA GAATGTTCAA GGAGACGGGC CATGTCAATG CCTACTTCCC GCTCTTTATT CCTGAGAGCT TCATTGCAAA AGAGGCTGAA CATATTGAAG GGTTTGCCCC TGAATGCGCC GTTGTCACCC ACGGCGGGGG TGAGGAGCTG GCAGAAAAGC TCTATATCCG CCCGACATCG GAGACCATCA TCTGGTCATC CTATAAAAAG TGGATTCAGT CTTACCGCGA CCTGCCGATT CTGATCAACC AGTGGGCCAA CGTTGTGCGC TGGGAGATGA GAACCCGCCT TTTCCTCAGA ACCACCGAGT TTCTCTGGCA GGAGGGCCAT ACCGCCCATG CAAACCCTGA AGAGTCGCAG GAAGAGGTGC TCCGCATGAT CAACGTCTAC AAAACCTTTG CTGAAGAGTA TATGGCCATG CCGGTCATCA TGGGCAAGAA AACCGACAAC GAAAAATTTG CCGGTGCGGT TGATACCTGG TGCATTGAAG CGATGATGCA GGACAGTAAG GCGCTCCAGG CTGGAACATC CCACAACCTC GGACAGAATT TTGCAAAAGC CTTCGACTGC CAGTTCCAGA CCAAAGATGG GGTGCTTGAC TATGTCTGGG CAACAAGCTG GGGTGTTTCG ACACGATTGA TTGGCGCCCT GATCATGGCC CACTCGGATG ATCGCGGCCT GGTGCTCCCA CCGAAACTTG CCACACGCCA GGTGGTTATC ATCCCCATTC TCAGGGGCGA CAAGGCCGCC GTCATTGAAC GGGCCAATGC CCTTGCTCAA GAACTCAACA AAAACGGTAT TCCCTCCTTT GTTGACAGCA GTGAACAGAA CTCCCCCGGA TGGAAATTTG CTGAATATGA GCTGCAGGGC ATTCCAATCC GTATCGAACT CGGGCCACGC GATATCGAGA AGGGTATCTG CATCGCCGCA CGACGCGACA CACTCGAAAA AACCGAACTG GCGCTCGACG AAACTCTGCC AGATCAAATC AGCGAAATTC TGAACACCAT CCAGGAAAGC ATGTTCGAGC GTGCACTCCA GTTCCGCACC GAGCACACCT TCGAAGTGCA GAGCTATGAA GAGTTCAAGG TGGCTGTTGA AAAGGGATTT GTCATCGCCC ACTGGGACGG CACGGCAGAA ACTGAAGCAA AAATCAAGGC TGAGACCAAA GCCACCATCA GGGTACTTCC CGAAGAGGCC GACTATATTG CGCAATACCG CATCGATGAA CCCGGCACCT GTATCTACTC AGGAAAACCT GCCGCACGAA AAGTTGTCTT CGCAAAAGCA TACTGA
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Protein sequence | MADKITSRSE DYSQWYIDLV RSAKLADYAD VRGCMDIRPN GYAIWEKMQA ALDRMFKETG HVNAYFPLFI PESFIAKEAE HIEGFAPECA VVTHGGGEEL AEKLYIRPTS ETIIWSSYKK WIQSYRDLPI LINQWANVVR WEMRTRLFLR TTEFLWQEGH TAHANPEESQ EEVLRMINVY KTFAEEYMAM PVIMGKKTDN EKFAGAVDTW CIEAMMQDSK ALQAGTSHNL GQNFAKAFDC QFQTKDGVLD YVWATSWGVS TRLIGALIMA HSDDRGLVLP PKLATRQVVI IPILRGDKAA VIERANALAQ ELNKNGIPSF VDSSEQNSPG WKFAEYELQG IPIRIELGPR DIEKGICIAA RRDTLEKTEL ALDETLPDQI SEILNTIQES MFERALQFRT EHTFEVQSYE EFKVAVEKGF VIAHWDGTAE TEAKIKAETK ATIRVLPEEA DYIAQYRIDE PGTCIYSGKP AARKVVFAKA Y
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