Gene Ppha_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0758 
Symbol 
ID6461357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp789166 
End bp789855 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content51% 
IMG OID642727012 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002017667 
Protein GI194335873 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.685577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAC CAGTTAAAAA AGAGCAGATT CCACATCTTC AGGAGGCAAT AAAAGAGAGC 
GCGTGGCGGC TGATTGCGGA GTTTGGTGCG CCAGCCCTTT CGTTGCGTGC TATTGCCCGT 
GCTTTGAGCA TTACGGCACC GGCTATTTAC AACTACTTCC CGGATCGTGA TGCATTGGTG 
ACTGCGCTCA CCATTGATGC TTTTACCTCA TTTGGTGATG TGCAGCTCAA GGCACGCGAC 
AGCTTTCCGC CAGAGCAGCT CCTTGAACGT TTCCGGGCGA TTGGTCTCGC TTATCGTGAT 
TGGGCTCTGC GTTATCCCCA GCGCTACCAG CTTATTTTTG GCACTCCTAT TCCCGGTTAC 
GAACAGCAAC AGCAGGAGAT TATACCATCA GCAATACGCT CCATCAGTGC ACTGGTCAGT 
GTGATTGAGG ATTTTCGTGT TGCTGGCAAG CTGAAGAGCG AAGACTTTCC GGCAATACCG 
CCTGGGTATG AGGCGCAGCT TTCGGCCATG AAAACCTGTA CCAGCAGGTA TCATTTTCTC 
TCGCATGGTG TTGCCCTGAT TGTCTGGAGT CGTGTCCATG GGCTGGTGTC GCTTGAAATT 
GGCGGTCGCC TTCCACCATT CGGGGTTGAC GGAGAGGGGC TTTATCACTT TGAATTACAA 
TCTATTGCCA AACAATTTAT AGAGGAGTAA
 
Protein sequence
MARPVKKEQI PHLQEAIKES AWRLIAEFGA PALSLRAIAR ALSITAPAIY NYFPDRDALV 
TALTIDAFTS FGDVQLKARD SFPPEQLLER FRAIGLAYRD WALRYPQRYQ LIFGTPIPGY 
EQQQQEIIPS AIRSISALVS VIEDFRVAGK LKSEDFPAIP PGYEAQLSAM KTCTSRYHFL 
SHGVALIVWS RVHGLVSLEI GGRLPPFGVD GEGLYHFELQ SIAKQFIEE