| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0557 |
|---|
| Symbol | |
|---|
| ID | 6461849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 543955 |
|---|
| End bp | 545154 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642726832 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_002017487 |
|---|
| Protein GI | 194335693 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.808631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGC TTGGGCAGCA AATGCTGCTA TCAAAAAATC CGTCATTGGT ATTTATTAGT
AATGGAATAA CTCCCTATGG CACTCATTTT CTTGAGAGAA TTGCTGGTGA GTTATTTGAT
TTTAAATTGC ACACGATCTA TTCTTATGAA TTCAGTATGG GTAAGTGGCA GATTACTCTA
AAACCCATAC TAAATGCAGT CGTTTTAGGC AAAGATGAGT ACGCGATTCA GCATTATAAT
CTCTCTGCGA TTAGACATTC TTATTCTCGA TATCTGCAAT TAGTTAAAGA AATAAAAACA
ATTAGCCCTA TTGCCGTAAT TGTTTTAGGA TATGGAAATA TCGCTCATTA TCTTTTGATA
GAATGGTGCT ATAAAAATGA TATAGCTTGT TTGATATTAG GTGATAGCAA TATACTCGGA
GATTGTAATA GTGGTTTAAG GTCATTTATA AAGTCGATTA TAGTAAAACG AGTTGTTTCC
TGTTGTAGTG CATTTCTTCC TTGTGGTACT CTTGGTAGCC AATATTTTGA AAAATATGGT
GCTCGGCCTG AGCAGATATT CTTTTCGCCT GTTGAGCCGG ATTATTCGTT GATTGAGGAG
ATTTCGACGG ATACAGTAAA GTCTCTGACG ATGCAGTTCA AATTTGATCC TGATCGTTAT
CGTCTAATAT ATTCCGGGAG GTTGGTTGCG ATTAAACGTC TTGATCTGTT AATCGATGCA
TTTGCTAAAA TTGCAGAGCA ACGTTCTGAA TGGGATTTAC TTATTGTTGG TGGTGGGTCT
TTGGAAGCAG AACTCAAAAT GCGTATTCCA GATTGGTTAA GGCATAGAGT TTATTGGACT
GGATTTGTCA GTTCTCAAGA GCATATGTCT GCACTGTATC AGTTTGCAGA TATATTGGTG
CTGCCATCGG ATTATGAGCC GTGGGCTCTT GTTGTTAATG AAGCAGTCTG CGCTGGTTTA
GCATTGGTTT GCTCTGATGC TGTTGGTGCT GCCTTTGAAT TGCTATGTGA TGGTGAGAAT
GGTCGTTATT TCCATGCAGG CGATGTGGAA TCGCTGATTG AAGCTCTATT GGATGTTACT
AAGGCAGAAA ATCTCCTCAA ATATAAAATT GCATCAAAGC AGATTCTTAG TTTATGGAGG
AAGAAAGCTG ACCCCGTTGA TGGGCTTAGA TGTGCTTTGG AATACTGTTT TCGAACGTGA
|
|---|
| Protein sequence | MIKLGQQMLL SKNPSLVFIS NGITPYGTHF LERIAGELFD FKLHTIYSYE FSMGKWQITL
KPILNAVVLG KDEYAIQHYN LSAIRHSYSR YLQLVKEIKT ISPIAVIVLG YGNIAHYLLI
EWCYKNDIAC LILGDSNILG DCNSGLRSFI KSIIVKRVVS CCSAFLPCGT LGSQYFEKYG
ARPEQIFFSP VEPDYSLIEE ISTDTVKSLT MQFKFDPDRY RLIYSGRLVA IKRLDLLIDA
FAKIAEQRSE WDLLIVGGGS LEAELKMRIP DWLRHRVYWT GFVSSQEHMS ALYQFADILV
LPSDYEPWAL VVNEAVCAGL ALVCSDAVGA AFELLCDGEN GRYFHAGDVE SLIEALLDVT
KAENLLKYKI ASKQILSLWR KKADPVDGLR CALEYCFRT
|
|---|
| |