| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0535 |
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| Symbol | |
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| ID | 6461932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 524396 |
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| End bp | 525199 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726821 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002017476 |
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| Protein GI | 194335682 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTACCA TAAAAGAACT CATGAACCTT CGAGGTCGCC GTGCATTGAT TACCGGTGCA
ACAGGATGTC TTGGTAAGAT GATGGCAGAT ACCTTGGCCG AACTGGGCGC TGATTTAGTG
TTGGTTGATA GACCAAAATC AGATTTTGAA ACACTTTGTA CAACCCTGAC TGAAAGATGG
GGTGTTAACG TTGAGCACTA TTTTTGTGAT CTTGAACTTC AAGAGCAGCG CAAAGAATTA
ATAGCCTTGC TAAAAAGTGA AGGCAAAGGT CTCAACATCC TCATCAATAA CGCAGCATTT
GTTGGCACCT CTGACTTGCA AGGATGGGCA GTTCCGTTTG AAGAACAAAC CGTCGAAACC
TGGCGTCGCG CATTGGAAGT CAACCTTACA GCCATATTTG ACCTTTGCCA AGGTCTGATG
TCTTTGCTCA AGGCTGCTGA GGGTGCCAGT ATCATCAACA TCGCATCAAT CTATGGTGTA
TACGGCCCAG ACTGGAGCCT GTATGAAGGT ACCAGCATGA GCAACCCGGC AGCCTATGGC
GTGTCAAAAG GCGGTCTCAT TCAATTCACC CGATGGTTGG CAACTACCAT TGCCCCCAGT
GTTCGCGTAA ATGCGATATC GCCTAGCGGG GTATTCAGAA ACCAGCCTGA AGCATTTGTT
CAGCGGTATA AAGCAAAAAC ACCGCTGGGT CGTATGGCAA CCGAAGATGA TTTTCGTGGC
GTTGTTGCAT ATTTGGCGAG TGATATGTCA AAGTATGTGG CCGGGCAAAA TATTGCGGTT
GATGGGGGTT GGGGAGTATG GTAA
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| Protein sequence | MSTIKELMNL RGRRALITGA TGCLGKMMAD TLAELGADLV LVDRPKSDFE TLCTTLTERW
GVNVEHYFCD LELQEQRKEL IALLKSEGKG LNILINNAAF VGTSDLQGWA VPFEEQTVET
WRRALEVNLT AIFDLCQGLM SLLKAAEGAS IINIASIYGV YGPDWSLYEG TSMSNPAAYG
VSKGGLIQFT RWLATTIAPS VRVNAISPSG VFRNQPEAFV QRYKAKTPLG RMATEDDFRG
VVAYLASDMS KYVAGQNIAV DGGWGVW
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