Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0459 |
Symbol | |
ID | 6462160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 445711 |
End bp | 447072 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642726746 |
Product | MiaB-like tRNA modifying enzyme |
Protein accession | YP_002017402 |
Protein GI | 194335608 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.240377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAC ATAGCAATAA AAAAGTTGCT GCTGTAACAC TTGGATGTAA ACTGAACTAT GCCGAAACAT CCACTATTCT TGATCAATTG TCCAAAAAAG GCTGGCTGTT ATCGTCGATT GGGGAGAGAG CAGATCTTAT TATTATTCAT ACCTGTGCAG TGACAAAACA GGCAGAACAG AAATGTCGTC AAAAAATAAG GGCGATTAAA AGAAAAAATC CCTCCAGCAA AATTGCTGTT ATTGGTTGTT ATTCCCAGTT CAACCCTGAA GCGCTTTCCG CAATAGATGG AATAGATGCA ATCCTCGGCA GTAACGATAA ATTTGACATA AAACGATATG AAGATATTCT GCTCGGGACG GAGCCATCAC CCCTTGTCAG GGTTACGCCA GCCAACACGA TTGAAAAGGT ATACCCAGGC TATTCACTGC CGGCAGCAGC AAGTTGTGAA CGAACCCGTG CATTTTTGAA AATACAGGAT GGTTGCGACA ATGGCTGTTC CTACTGTGCA ATTCCCCTGA TCAGGGGAGG GTCACGATCC CTGCCTGCTG CCCATATTGT CGAGCGAGCC CATCTGCTGG CCTCGTCCGG ATATCGGGAG ATTGTGCTTA CCGGTGTCAA TACCGGTGAT TATCGTTCTG GAGGCCTCAA GCTGAAAGAG CTGTTACGCA TGCTTGAAGA GGTCAGTATC AGTCGTATTC GTATCAGCTC CATAGAGCCC GACATTGTTG ACCGTGAGCT GATTGCACTT GTTGCAGGAT CAAAAAAAAT TGTACCCCAT TTTCATATTC CCCTTCAAAG TGGTTCCGAC AGAATCCTCA GGGCCATGCG CCGCCATTAC GATACGGCAC TCTATCGCGA CCGGGTGTTG ATGTCGGTTG AAAACATTGC TGACTGTGCA ATTGGAGCCG ATGTCATGGT TGGCTATCCA GGAGAAACAG AAGAAGATTT TCTGAAGATG TACCATTTTA TTGAAGAACT TCCTCTTGCC TCCCTTCATG TGTTCAGTTG TTCAATTCGT CCCGGAACCC GGCTTGCCCT CCAGATCACA AACAGTGAGC GCAAACCCGT TGAATCCGCA GAGATCGCCC GGCGCTACAG CGAACTTGCA GAGCTTGGCC GTCGGCATGA AGCCCGCTTC AAGGCACGTT ATACCGGAAA AGAGTGCATG GTACTCATCG AGCGCTCAAA GCCCGTGGAG GCGGGGCAGC CCGCATACAG CGGTTATACC CGAAACTACC TCAGAGTCCT GGTTGAGAGC AACGAAAGCC AATTGCAACA CACCCTTCCA GGAAATGAAG TGCCGGTACG GATCGACTCC CTCGATGAGG ATTTGAATTT AAAAGGGAGA GTGCTATCTT GA
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Protein sequence | MKEHSNKKVA AVTLGCKLNY AETSTILDQL SKKGWLLSSI GERADLIIIH TCAVTKQAEQ KCRQKIRAIK RKNPSSKIAV IGCYSQFNPE ALSAIDGIDA ILGSNDKFDI KRYEDILLGT EPSPLVRVTP ANTIEKVYPG YSLPAAASCE RTRAFLKIQD GCDNGCSYCA IPLIRGGSRS LPAAHIVERA HLLASSGYRE IVLTGVNTGD YRSGGLKLKE LLRMLEEVSI SRIRISSIEP DIVDRELIAL VAGSKKIVPH FHIPLQSGSD RILRAMRRHY DTALYRDRVL MSVENIADCA IGADVMVGYP GETEEDFLKM YHFIEELPLA SLHVFSCSIR PGTRLALQIT NSERKPVESA EIARRYSELA ELGRRHEARF KARYTGKECM VLIERSKPVE AGQPAYSGYT RNYLRVLVES NESQLQHTLP GNEVPVRIDS LDEDLNLKGR VLS
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