Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0402 |
Symbol | rpsO |
ID | 6462325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 388566 |
End bp | 388835 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642726689 |
Product | 30S ribosomal protein S15 |
Protein accession | YP_002017347 |
Protein GI | 194335553 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0216687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGA CAAAAGAGTT TAAAGCCGAC GTAATCAAGC AGTTTGGCGC TTCAGAGAAG AATACCGGAA AATCCGAGGT TCAGGTTGCC TTATATACCC GTAGAATCAG CGATCTTACT GGACATTTGC AGTTGCACCC GAAAGACAAG CATTCGCGTC GCGGATTGCT GATGCTTGTG GCAAAGCGCA AGAAAATGCT GAATTACGTG AAAAATATCG ATATTGATCG TTATCGCAAA GTGATAGCTG AACTTGATCT TCGCAAGTAA
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Protein sequence | MSLTKEFKAD VIKQFGASEK NTGKSEVQVA LYTRRISDLT GHLQLHPKDK HSRRGLLMLV AKRKKMLNYV KNIDIDRYRK VIAELDLRK
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