Gene Ppha_0317 details

Gene Information

• Locus tag: Ppha_0317
• Symbol: rplQ
• ID: 6461193
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 302486
• End bp: 302944
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642726609
• Product: 50S ribosomal protein L17
• Protein accession: YP_002017267
• Protein GI: 194335473
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0203] Ribosomal protein L17
• TIGRFAM ID: [TIGR00059] ribosomal protein L17

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0814309
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAAAG TTAAGCCGGC AAGAAAACTC GGAAGAACCG CAGCCCATAG AAAGGCGACG 
CTCAGCAATC TGTCAACGCA ACTGCTTGTC TACAAGCGCA TTGAGACGAC AGAGGCAAAA 
GCGAAAGAGA CCCGCAGGGT TGTTGAGAAA ATCATTACCA AAGCTCGCAA GGGTACGGTT 
CATGCCCAGC GCGAAATATT CAAGGATATT CGTGACAAAC AGGCAATCAG AATTCTGTTT 
GAAGAGATTG TCGCCAAGGT TGGTACCCGT CAGGGAGGAT ATACTCGTGT TATCAAGCTC 
GCTCCCCGTT TTGGAGACGC AGCAAAAATG GCAGTGATTG AACTTGTCGA TTATCAGGAA 
GCACCATCAG CAAGCCAGAA GACTGGCAAG CAGGATCGTG CCAAACGAGT CAAAGGTTCC 
AAGAAAACCG CTGAAGCAGC AGTTTCTGTG GCCGGGTAA 

 

Protein sequence

MRKVKPARKL GRTAAHRKAT LSNLSTQLLV YKRIETTEAK AKETRRVVEK IITKARKGTV 
HAQREIFKDI RDKQAIRILF EEIVAKVGTR QGGYTRVIKL APRFGDAAKM AVIELVDYQE 
APSASQKTGK QDRAKRVKGS KKTAEAAVSV AG