Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0124 |
Symbol | |
ID | 6461968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 140046 |
End bp | 140942 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642726434 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002017094 |
Protein GI | 194335300 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTATGGA GGCGTCGGTG GATTTCTTCT TCATACGCCG ACTCCCTGTT ACCTGAGGAT ATTCCGCAGG GCTTCGTCGG TTTCTCTTGC CTCCAGCTCG ATGGCGTTCA GCTCTTCGGC GATCTCGCAT TTCACAAGAA GGCCGCCGGA ACCGGTGCAG GGATCGTAGA TCTCCATGCC CGGTTCCGGC GCAAGCACGC GTGGCATGAT GGTGGCAACT TCGGAACAGT AGTCATTCGA AACGGGCAGG GAAAAAATCG CAGAAACAAT TTGCATAAAA GAACGATCGT TCTTAAATTC GATCAAAGAG AACACATTAT GTCAAGACCG AAAAAAGTCA CCGACTCTGA AATACTCGAT GCAATCGAGC GGGTTGTTGT CAAGCATGGT GCATCCCGCC TCTCCATCGA TGCTGTGGCT CAGGAGGCAG GAATCAGCAA ATCGAGGGTG GTTTACGACT ACAAATCCAA GACCGCCCTG CTCGAAGCTC TGATCGACCG GCAGTTTGAG CGCGATACGG CACGCATCGA ATCAGCGCTT GTCGAGTGCG CCGACACCCC TCACCCCGAA CTTTTCGCAC GTCTCAAAAT TGCCGAGCGT GCCTTGGATG ATACGGAACG CGCTGTCTCC ATGGCTATCA CATCCTCCAT GTCGAGCGAG GAGTCGCTTC GGCAGCGGAT GCTGAAGTGG ATAGAGCGGG ACTTGCTTGC CATGGATAGC GGAGCGAAGC CTGAAGCGGC CCGCATGGCC TATTTTGCCT TTATAGGATT CAGTTGCCAC GAGTGGTTCG GCCTTGTCGA CAGAAGCGAC GAGGAGCGTC TGCCCTTCCT GGAACAGATC CGGAAGATGT ATATCGGTTA TCCTGAAAGC CATCCGACAA CCACACCAAA CCCATAA
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Protein sequence | MVWRRRWISS SYADSLLPED IPQGFVGFSC LQLDGVQLFG DLAFHKKAAG TGAGIVDLHA RFRRKHAWHD GGNFGTVVIR NGQGKNRRNN LHKRTIVLKF DQREHIMSRP KKVTDSEILD AIERVVVKHG ASRLSIDAVA QEAGISKSRV VYDYKSKTAL LEALIDRQFE RDTARIESAL VECADTPHPE LFARLKIAER ALDDTERAVS MAITSSMSSE ESLRQRMLKW IERDLLAMDS GAKPEAARMA YFAFIGFSCH EWFGLVDRSD EERLPFLEQI RKMYIGYPES HPTTTPNP
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