| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0087 |
|---|
| Symbol | |
|---|
| ID | 6462225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 92811 |
|---|
| End bp | 93152 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642726390 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_002017060 |
|---|
| Protein GI | 194335266 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA TTACAGCAAT CATTCAGCCT GACAGGCTCG ATCATGTGCG CGAGGCACTG
ATTCAGGCAG ATATAACAAG GATTACCGTC AGTCGTGTAA CTGGCCATGG CCGACAGGAG
GATATTGAGA TATACCGCGG CCAGAAAATA GCGCCAAACC TGATTCCAAA AATCCGACTT
GATATTGCCG TCAATAATGA GTTTGTCGAT ATAACGGTCG ATACCATCAT TAGCGCTGCA
AGTCATGGTG TTGGTGAAAT CGGTGACGGG AAGATCTTTA TCACCCCGCT TGAAGAGTGC
ATCCGTATCA GAACAAGGGA GCGTGGCGGA AAGGCGATAT AA
|
|---|
| Protein sequence | MKLITAIIQP DRLDHVREAL IQADITRITV SRVTGHGRQE DIEIYRGQKI APNLIPKIRL
DIAVNNEFVD ITVDTIISAA SHGVGEIGDG KIFITPLEEC IRIRTRERGG KAI
|
|---|
| |