| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0029 |
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| Symbol | |
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| ID | 6462771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 27616 |
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| End bp | 28758 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642726331 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_002017003 |
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| Protein GI | 194335209 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTTATG ATGTCGCAGT AATCGGTGGT GGCCCCTCAG GAGCCGTAGC AGCCGCCGTA
CTGGCCAAAG CCGGAATATC AACCGTTCTC ATTGAACGAA ACCTTGACAA CGTCAAACCC
TGCGGGGGAG CAATTCCTCT TGGTCTTATC GAGGAGTTCC AGATTCCTGC CGAATTGATA
GAAAAAAAGC TCTCCCGCAT GAGAGCCCGC TCTCCAAAAG GGAGGATCAT TGAAATGCAT
ATGCCGAACG GCTATGTCGG CATGGTACGA CGCGAAAAAT TTGATCGCTA TCTGCGTTCT
GAAGCTGAAC GGGCCGGAGC CGTCATTGTT GAAGGACTGG TCAAATCCAT CTCACACTCG
GGAGACGGCT TTGTCATCAA TACACTCAAC GACAAGGTGG CGCCACTGCG AGCTCGCAAG
ATTATCGGAG CCGACGGCGC AAACTCAAAA ACTGCCGATG AACTGCACTT TCCGCTCAAC
GAACTGAAGG TGATTGCCAT GCAGCAGCGA TTCAAATACA CCCCGGCCAT CCAGAAATTC
AGCGATATCG TTGAAATATG GTTTGACGGC GAGGTCTCTC CTGACTTTTA TGGGTGGATT
TTCCCCAAGG CGGATCATCT GGCAATCGGT ACCGGGACAG AGGACAAGCG GCACAACCTC
AAGGCGCTCC AGAAACGCTT TATTGAAAAA ATCGGGATCA CCGATGCCCC CTATCTTGAC
GAAGCTGCAA AAATCCCGAT GAAGCCACGC AAATCATTTA CCCAGGAGAA GGCGATCCTT
GTCGGAGACG CTGCAGGACT GGTCACACCG GCAAACGGAG AAGGAATCTT CTTTGCCATG
CGCTCCGGAA AACTTGGGGC TCAGGCCATG ATTGAGCATA TAAAAAACAA GACCCCCTTG
CAGAACTATG AAAAAGAGTT CCGCAAGCTC TATGCTCCGA TCTTTTTCGG TCTTGAAGTG
CTGCAGGCAG CCTACTACCG TAACGACCGA CTGAGGGAGA GTTTTGTCGC CATATGCGCC
GACGATGATG TACAGCAGAT AACCTTCGAC TCCTATCTCT ATAAAAAAAT GGTGCCTGCT
CCCTGGTCAA CCCAGATGAA GATCTTTTCC AAAAATATCT ACCACCTCAT CAAGGGCTGC
TAA
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| Protein sequence | MRYDVAVIGG GPSGAVAAAV LAKAGISTVL IERNLDNVKP CGGAIPLGLI EEFQIPAELI
EKKLSRMRAR SPKGRIIEMH MPNGYVGMVR REKFDRYLRS EAERAGAVIV EGLVKSISHS
GDGFVINTLN DKVAPLRARK IIGADGANSK TADELHFPLN ELKVIAMQQR FKYTPAIQKF
SDIVEIWFDG EVSPDFYGWI FPKADHLAIG TGTEDKRHNL KALQKRFIEK IGITDAPYLD
EAAKIPMKPR KSFTQEKAIL VGDAAGLVTP ANGEGIFFAM RSGKLGAQAM IEHIKNKTPL
QNYEKEFRKL YAPIFFGLEV LQAAYYRNDR LRESFVAICA DDDVQQITFD SYLYKKMVPA
PWSTQMKIFS KNIYHLIKGC
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