Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1889 |
Symbol | |
ID | 5052971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1963732 |
End bp | 1965084 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640472063 |
Product | hydroxypyruvate reductase |
Protein accession | YP_001156665 |
Protein GI | 145590068 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2379] Putative glycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000303684 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAA ACAGTACCCT GCTCTCTCAG ATAGCAAGCA AAGAAGCGAT TCTCAAAAAC GCTTTTGCCG CTGCAGTAGC CGTTGCTGAT CCACAAATCA TCGTTCCCCA ATATTTAGCA AAGATATTTC CAGTTGGGCA AGAGCCAACA GGAAAGTGCC TGGTAGTAGG CGCTGGAAAA GCCAGTGCAT CCATGGCTAG TGCACTTGAG GCTTATGCAA AAACGCATTG GCCCCAAGTT AGGTTGGAGG GTGTGGTGCT TACGCGCTAT GGCCATAACT CACCAACTAA TTGCATCAAG ATTGTTGAGG CAGGACATCC AGTGCCTGAT CAGGCGGGGA TGGATGGGGC AAAAGAAATT TTGGGATTAA CAAATCAGCT CAAACAGGGT GATGTATTAA TTGCCTTGGT ATCTGGCGGA GGATCTAGTC TTCTTACATT ACCTCAAGAG GGAATTTCGA TTGAAGATAT GCGCAGGACT ACTGAAGCGC TCTTACGAAG TGGCGCACCC ATTGAAGAAA TGAATGTAGT ACGCAAACAT TTATCTGCTA TCTTAGGCGG TAATTTAGCT AGAGTAGCTA TTGAACGAGG TGCAAGGGTA GAGGCTTTAC TGATTTCTGA TGTCACGGGC GATTCACCAG CGGATATCGC AAGCGGACCT TGCGCTGCCG ACTATTCCAC CTATTTAGAT GCACTCAATA TCTTAGAAAA GTATCGATTA GATGAACAAT CGATACCTGT ATCGGTACTT AATCATCTCA AGCAAGGCCT GGCAGGGGAA AAGCCAGAAA CCTTAAAAGA TATTGATCTT GTAAGTGCGC AGGTGGCTAA TCATGTCATC GCTACAGCCT ATAAAAGCTT AGAGGCAGCT GCTGAGTATG TTCGTGCTCA GGGTTACGAT CCCATTATTT TGGGCGATAC GATTACTGGT GAGGCGCAAG AGGTAGGTAT TGAGCAAGCT GCATTAGTGC GCAACTATCT TGCAAAGGGA CTCAATACCC CAAAAGCCAT CATCTCAGGC GGTGAATGCA CTGTAACCAT CCCAGGAGAC ATCAAAGGTA GAGGGGGTCG TTGTAGTGAA TATTTACTCT CTCTCTTTGC TGCATCTAAA GATCTGCCTC ACTTGTCTGC ATTAGCTGCC GATACCGATG GAATTGATGG TAGCGAAAAG AATGCCGGAG CCTGGTTTGA TGGCGTAGTT CGCCAATCTA GCCAGATAGC AGGTCTAGTA CCAGACAAAT TTTTATCACT GCATGATTGC TATGGCTTCT TTGCAGAATT GGCCGCTTTA GTAGAAACTG GCCCTACACT TACTAATGTG AATGATTTCC GCATCATCTT GCTAGAAAAA TAA
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Protein sequence | MTQNSTLLSQ IASKEAILKN AFAAAVAVAD PQIIVPQYLA KIFPVGQEPT GKCLVVGAGK ASASMASALE AYAKTHWPQV RLEGVVLTRY GHNSPTNCIK IVEAGHPVPD QAGMDGAKEI LGLTNQLKQG DVLIALVSGG GSSLLTLPQE GISIEDMRRT TEALLRSGAP IEEMNVVRKH LSAILGGNLA RVAIERGARV EALLISDVTG DSPADIASGP CAADYSTYLD ALNILEKYRL DEQSIPVSVL NHLKQGLAGE KPETLKDIDL VSAQVANHVI ATAYKSLEAA AEYVRAQGYD PIILGDTITG EAQEVGIEQA ALVRNYLAKG LNTPKAIISG GECTVTIPGD IKGRGGRCSE YLLSLFAASK DLPHLSALAA DTDGIDGSEK NAGAWFDGVV RQSSQIAGLV PDKFLSLHDC YGFFAELAAL VETGPTLTNV NDFRIILLEK
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