Gene Pnuc_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1850 
Symbol 
ID5052042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1927385 
End bp1928014 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID640472024 
Producthypothetical protein 
Protein accessionYP_001156627 
Protein GI145590030 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.129061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGA TTCAATTTTG GATTGGCATT GTTGCAACCA TGGCGTTTGC TGTGACCGGC 
GTGCTGGCAA TCGCTGATCG TGGCGTGGAT ATTTTTGGCG TGCTCGTTTT GGGTTTAATT 
ACTGCAATTG GTGGCGGAAC CATTCGCGAC ATCATTTTGG AGATTCCTCC ATTTTGGTCA 
GAAAATCAAA TTTATGTTTG GCTCGCATTG GCAGCAAGCG TCGCCACTTT TTTTGCTGAA 
TCTTTTTTTA CTCAGCCACA AATTTATCGT TGGATGCTAT ACATCGATGG ATTTGGTGCT 
GCCTTATTTG CTATTCAAGG AGCGACTAAA GCTTGGATGA TGGGTTTTGG TTTGCCTGTG 
GGGCCAGTTA TTTTAGGTGT TATTACGGCC ATTGGTGGTG GCCTTATACG AGATGTACTG 
GCTGGTCGTA AAACACTCAT CATGTCGCAT GAGCTTTATG CAATTCCGGT AACGCTCGGC 
TGCTCAGTTT ATGTGCTCAT CCTCAACTTT ACGCCGCAAT ATGCAATTGA GGGCTCTGCC 
TTTTGCATGC TGGGTATCTT TGCTATACGT GCAGCCGCTA TTCATTGGGA TTTACACGTT 
CCCAAAATGT TTATTACTAA AACGCGCTAA
 
Protein sequence
MEEIQFWIGI VATMAFAVTG VLAIADRGVD IFGVLVLGLI TAIGGGTIRD IILEIPPFWS 
ENQIYVWLAL AASVATFFAE SFFTQPQIYR WMLYIDGFGA ALFAIQGATK AWMMGFGLPV 
GPVILGVITA IGGGLIRDVL AGRKTLIMSH ELYAIPVTLG CSVYVLILNF TPQYAIEGSA 
FCMLGIFAIR AAAIHWDLHV PKMFITKTR