| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1705 |
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| Symbol | |
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| ID | 5053724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1772373 |
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| End bp | 1773287 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471878 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001156482 |
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| Protein GI | 145589885 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCACTG TATTTCAATT TCAGGATTGG GTCATCGCTC ATTCGCAGCG TGCTGAATCT
GCTTTGGACC GTTTGCTAGA TTCTGAAAAA ACCATTCCCC ATCGTTTGCA TGAAGCGATG
CGTTATGCGG CGCAAGGCGG AGGTAAACGT ATTCGACCTT TATTGGTTTA TGCGGCTGGC
CAACTTGGTA ATTCAATAAA TGAACAAGCT GATCAAGAAA AAAATGCGGC CCTAGATGCA
GCTGCAGTTG CCATTGAATG TATCCATGCC TACTCATTGG TGCACGATGA TTTACCGTGC
ATGGATGATG ATGATTTAAG ACGCGGCCGA CCTACAGTGC ATAAGGCGTT TGATGAAGCG
ACTGCATTAT TAGTGGGTGA TGCCTTGCAA ACTCGTGCAT TTGAGATCTT GGCTAATGCG
AAATGCGACG CGAATATCCG CTTAGCAATG ATTAGCGCTT TGGCGGCAGC CTCTGGCTCA
CGTGGCATGG CAGGCGGACA AGCAATAGAT CTGGAAAGCG TGGGTAAAAA ACTCGATCTT
GATGGCTTAA AGCAGATGCA CGCTATGAAA ACAGGTGCTC TGCTATCTTG TGCAACAGCT
TTGGGTGGTA TTGCTGCCGG TTTGTCTCCT GCGCAGATGA CTCAGTTGCT GGTCTACTCA
GAAGCGCTTG GCTTGGCATT TCAGGTGGTT GATGACGTAT TAGATGCTAC CGCTGATAGT
CAAACCTTAG GTAAAACGGC CGGCAAGGAC GCTGCGGCAA ACAAGCCCAC CTATGTGACC
TTGATGGGTT TAGACTATGC ACAGAAGCAG GCTAAAACAT TGCAAGAAAC TGCAAGTGCC
AGCTTGAAAG AATTTGGCAG TAAATCCGCA GCCTTAAAAG ATTTAGCCCT GCTGGTCGTC
AATAGAGCTA AATAA
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| Protein sequence | MSTVFQFQDW VIAHSQRAES ALDRLLDSEK TIPHRLHEAM RYAAQGGGKR IRPLLVYAAG
QLGNSINEQA DQEKNAALDA AAVAIECIHA YSLVHDDLPC MDDDDLRRGR PTVHKAFDEA
TALLVGDALQ TRAFEILANA KCDANIRLAM ISALAAASGS RGMAGGQAID LESVGKKLDL
DGLKQMHAMK TGALLSCATA LGGIAAGLSP AQMTQLLVYS EALGLAFQVV DDVLDATADS
QTLGKTAGKD AAANKPTYVT LMGLDYAQKQ AKTLQETASA SLKEFGSKSA ALKDLALLVV
NRAK
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