Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1660 |
Symbol | |
ID | 5053422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1721966 |
End bp | 1722913 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640471833 |
Product | hypothetical protein |
Protein accession | YP_001156437 |
Protein GI | 145589840 |
COG category | [S] Function unknown |
COG ID | [COG4301] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03438] probable methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAC TCAGCACCCT AGAAGTTACG GTTACAACTA AAAAAGGCTT TGCTCACGAG ATCGAAGTAG GCCTGCTAGC TCAATCAGCC TCTATTTCTC CAAAGTTTTT ATATGATCCC TTAGGGTCAC ATCTTTTTAC AGCTATTACC TTGCTGCCCG AATACTACCC AACCAATACC GAAAAGAATA TTTTTTCCCA ACATCAAGCA GAAATTACTA ATGCAATAGG AGTCGGTGGC ACCCTCATTG ATTTGGGTGC TGGAAATTGC CAGAAGGCAG AATCCTTTTT TAACTCGCTA AAGCCCTTAA GCTATCTTGC GATCGACTTT TCAGCTGAAT ATCTCGAAGA AGCAGTAAAG AAACTTGAGG GGAAATACCC GCACATTCTC ATGCAATGTA TTGGTATGGA TTTTTCCAAA CAACTCTTGA TTCCGAGCGC TATTGCTACA AGTAAGCGAA TCTTTTTTTA TCCTGGCTCT AGTATCGGAA ACTTCCTTAG ACCAGAAGCA CTTCACCTCC TGAGCCAAAT CAAAAGCCAA GGTAATGCTG GTGGATTACT CATTGGCGTT GACTTAATGA AGGAAGACTC TGTTCTGATG GCCGCATATG ATGACCCCCT GAAGGTCACT GCAGCGTTCA ATCTCAATAT CCTGAGATCC ATTAACTTGC ACCTGAACTC TGATTTTAGG GTTGAGCAAT TTCGCCATCG AGTGAAGATT AATCATGCAG AAAATAGGGT TGAGCTTTAT TTAGAAGCCC TTGAAGACCT CACTGTTACA TGGCCCGGAA ATTCTAGAGA ATTCAAAAAG GGTGAATTAA TTCATACTGA AAACTCTCAC AAGTACACTA TTGAATCTAT TCAGCAATTA TTAAATGACG CAGGTTTTGA AAAAACCCAA ATCTGGACTG ATCCAAAAAA CTATTTTGCC GTAATCTATG CACAATAA
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Protein sequence | MQTLSTLEVT VTTKKGFAHE IEVGLLAQSA SISPKFLYDP LGSHLFTAIT LLPEYYPTNT EKNIFSQHQA EITNAIGVGG TLIDLGAGNC QKAESFFNSL KPLSYLAIDF SAEYLEEAVK KLEGKYPHIL MQCIGMDFSK QLLIPSAIAT SKRIFFYPGS SIGNFLRPEA LHLLSQIKSQ GNAGGLLIGV DLMKEDSVLM AAYDDPLKVT AAFNLNILRS INLHLNSDFR VEQFRHRVKI NHAENRVELY LEALEDLTVT WPGNSREFKK GELIHTENSH KYTIESIQQL LNDAGFEKTQ IWTDPKNYFA VIYAQ
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