Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1637 |
Symbol | |
ID | 5052605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1704114 |
End bp | 1705094 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640471810 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001156415 |
Protein GI | 145589818 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.115399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAT TAGTTACTGG TGGAGCTGGA TTTTTAGGGC AAAAACTTGC TAATCAGTTA TTAAGTCGTG GGTCTTTAAA AGACTCGGAT GGGGCCGAGC AAAAAATTGA GCAACTCATA CTGGTTGATG TTGTTAAGGC CAATGATTTT GGCGATTCAC GAGTTAAGGT GATCGCTGGA GATATTGCGG ATCCTAAGCT CATTCAGGGA TTGATTACCC CAGAGATTAA ATCTATCTTT CACTTAGCCG CTATCGTTAG CGGCCAAGCA GAGGCTGACT TTGACTTAGG AATGCGAATT AATCTGGATG CTGCACGACT ATTGCTAGAG GCTTGCCGCA AAGCGGGGCA TAAACCCAAA ATTATCTTTA CTAGTTCGGT AGCTGTATAC GGTGGAGCTC TTCCAGAGAT GGTTTTGGAT ACAACAGCCT TAAACCCTCA ATCATCGTAT GGCACTCAAA AGGCAATCTG TGAGCTTTTA CTTAATGACT TCACTCGCAA GGGTTTTGTA GACGGCAGGG TATTACGTTT ACCCACTATT AGTGTTCGCC CTGGAGTTGC TAATAAAGCA GCATCTTCGT TTGCTAGCGG AATCATTCGC GAGCCTTTAA ATGGTCAACC TTCCATTTGC CCAGTTTCAC CTGACTTGCG TATCTGGTTG TTATCACCCC TTTATGCCAT TGAATCTTTG ATTACTGGCC ATGACTTAGA TTCAAGCAAA TTGGGCTTGA ATAAGTCAAT CAATCTTCCT GGTGTTTCAG TAAGTGTTGG TGAAATGATT GAAGCACTAC ACAAAGTGGC TAGTGAAGAG ACTGTTTCTC TCATTTCCAT TGAGCCAGAT CCAAAGGTAG AGGCGATCGT AAGAAGTTGG CCTGCATCCT GGGATGCCAG CAGAGCTCAA GCATTGGGTT TAAAGTCTGA CCCCAATTTT CAAAGTATTG TTGAGGCCTA TATTGAGGAT GAGCTTAAAG GTAAGAGTTA A
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Protein sequence | MKVLVTGGAG FLGQKLANQL LSRGSLKDSD GAEQKIEQLI LVDVVKANDF GDSRVKVIAG DIADPKLIQG LITPEIKSIF HLAAIVSGQA EADFDLGMRI NLDAARLLLE ACRKAGHKPK IIFTSSVAVY GGALPEMVLD TTALNPQSSY GTQKAICELL LNDFTRKGFV DGRVLRLPTI SVRPGVANKA ASSFASGIIR EPLNGQPSIC PVSPDLRIWL LSPLYAIESL ITGHDLDSSK LGLNKSINLP GVSVSVGEMI EALHKVASEE TVSLISIEPD PKVEAIVRSW PASWDASRAQ ALGLKSDPNF QSIVEAYIED ELKGKS
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