Gene Pnuc_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1530 
Symbol 
ID5053554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1599882 
End bp1600430 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID640471703 
Producthypothetical protein 
Protein accessionYP_001156308 
Protein GI145589711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0590292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA AATCCATGGA TATTCCGATG ATGGCGAGTC AACAAAAAGT AGTCGATGCC 
GGTCAAGCGG TAGGGCGTGT GGCTATGGAA AGCGCCCAAG CAATTGCGAA AATTAATCAA 
CAGGCCGCTC AAGAATTTGC TGCACAAATT CAAGCAAGAA TGTCAGAGCT AATGAAGACA 
CAAGATCCGA AAGCTGCTTT TGACTATGTA CATGCAGAAG TATTGCAAGA GGCTGCTAAA 
GAGGTGACGC AATATCACCA ACAATTATTA GATGCTCTAA AAAGCGGTAA TCAAGAATTG 
GTTGATATTG CTGAAGAGCT GATTCAGTCT TCTAAGGCGG ATCTGATTCA TTTTGTAAAT 
GATGCGACTA ACAATGCACC CATGGGTAGT GAAGCTTATG TTTCAGTATT TAAAACATCA 
TTTAATAATG CCTTACAAAA CTTTGAAATG ATCCGCGCAG CAATGGCGGA TTCATTTACG 
AACTTTGAGC AGAGCGTTGA AAACGTCTCC AATCTTGCTT CACCCAAGAC TTCTAAAAAG 
AAATCTTAG
 
Protein sequence
MSKKSMDIPM MASQQKVVDA GQAVGRVAME SAQAIAKINQ QAAQEFAAQI QARMSELMKT 
QDPKAAFDYV HAEVLQEAAK EVTQYHQQLL DALKSGNQEL VDIAEELIQS SKADLIHFVN 
DATNNAPMGS EAYVSVFKTS FNNALQNFEM IRAAMADSFT NFEQSVENVS NLASPKTSKK 
KS