Gene Pnuc_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1519 
Symbol 
ID5053421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1592641 
End bp1593216 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content40% 
IMG OID640471692 
ProductYceI family protein 
Protein accessionYP_001156297 
Protein GI145589700 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA AATTACTTAT CGCCTTATTT GCTGCAGTAG GCATTGCTAC TTCTGTTTAC 
GCAGCACCAA CTACTTACAC TGCTGATGCA AATCACACAT TTGCGCAATT TGAATATAAC 
CATTTAGGTT TTTCAAATCA GACTAGCCGC TTTAATAACG TAACCGGCAC CGTAACAATT 
GATCAGGCTG CAAAAAAGGG AAGTGCGGAT ATCACTATTG ACACCAAGTC AGTCGATACT 
GGATCAACTG TTTTTAATAG TCATATTCAG AGCGAAGATT TTTTATCTAC GACACAATTT 
CCAACGGCAA CCTTTCAATC GAATGACATA ATTTTTAAAG GTGATAAACC CGTTGAATTG 
AAAGGTGTTT TGACGCTCAA GGGTGTAAGC AAGCCAGTGA CCTTAAAAGT AAGTAATTTT 
GAGTGCAAAA AGCACCCAAT GACTGGCGCT GACTATTGCG GCGCTAATGC AGTGACTAAG 
GTAAAACGTA CTGAGTTCAA TATGGGTAAA TATGCTCCGA ATGTAGGCGA CGATGTCACT 
ATTACGATTG CTATCGAGGC AGCCAAAAAA GAGTAA
 
Protein sequence
MKSKLLIALF AAVGIATSVY AAPTTYTADA NHTFAQFEYN HLGFSNQTSR FNNVTGTVTI 
DQAAKKGSAD ITIDTKSVDT GSTVFNSHIQ SEDFLSTTQF PTATFQSNDI IFKGDKPVEL 
KGVLTLKGVS KPVTLKVSNF ECKKHPMTGA DYCGANAVTK VKRTEFNMGK YAPNVGDDVT 
ITIAIEAAKK E