| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1510 |
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| Symbol | |
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| ID | 5053709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1585634 |
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| End bp | 1586821 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471683 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001156288 |
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| Protein GI | 145589691 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGTT TCTTGATCGC CGCTTTCTTA TTGCTGGTCT TAGTATTCGT ATTGCTGCTC
AGGCCATTTA TTTATGCTGG CAAAGATGAG GGAACCTCAC GTCGCCAAAT GAATGCTGCA
ATTTATCGTG ACGAACTTGA GAAGCTTGAG ACTGAATGCA TCGCAGGTGC TATTAATGTC
CAAGAGTATG AGATGAGTCA TGCGGAAATG CGCCAACGTC TTTTTCAGGA TACGACCGAG
GAGGATGACC GGGCCACCAT GGGGTCTCCA GCCAAGACGG TGATTGGCAT CTGCATCTTC
ATTACATTGA TTTCAGTTGG ACTGTATATT TTCTTAGGGG ATGGCGTGCG GGTTGCGCAA
CAGGCATCTC AAAAGCCGGT GTCTCAAGAA GCGGTACAAA AAATGGTGGC TGAATTTGCT
GCCAAGATGG AACAAGATCC AGATAATTTA AAAGGGTGGG CTATGTTGGC GCGCTCTTAT
CGGATCTTAG GCCGCACAGA AGATGCTGCA AAAGCCTATG GGCGTGCTGG AACCTATCTG
GATTCAGATC CAGAGCTATT GGCTGAGTAT GCCGATACCT TGGCAACCAT TGCCAATGGC
AATTTTTCTG GCAAGCCCTT GCAACTAATT AATCAAGCAC TAAAGATCGA CCCGAATAAT
TTCTTAGCGC TTTGGTTATC CGGAACGGCA TCGTATACCT CTGGTAATTA CAAGGCAGCA
GTACAAACTT GGGAAAAACT ATCTAAACAA TTACCCCCTA ATACTGACGA AGCTCGTGCT
ATTGAGGGCT CAATTGCCGA AGCGCGAACC AAAGGCGGAC TATCCGCTCC AGCAGTAGCA
TCAACTGGAA AAGGGATTAG TGGCGTAGTG GAGTTATCAG CTGAACTTAA GTCTAAAGTG
AAACCAGGTG ATGTTCTGAT GGTGATTGCG CGTCAACCGG GTGAGCGGAT GCCGGTAGCC
GTTCTACGTG AATCTGCTGC CGAGTTTCCA ATGCGCTTTG CTTTAAATGA TGCTTTGGCC
ATGAATCCCA ATCAGCCGCT TTCAAAGCTG CCTGAGGTTA CGCTTGAAGT GAGAATATCT
AAAACTGGAA TGGCTAAGCC TGAGGCTGGA GATTTGCTGT CTTCTCCGCA GACTGTTAAG
GTTGGCGCTA ATCAAGTGCA TTTGATTGTT AATCAAGTTC GGCAGTAG
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| Protein sequence | MTSFLIAAFL LLVLVFVLLL RPFIYAGKDE GTSRRQMNAA IYRDELEKLE TECIAGAINV
QEYEMSHAEM RQRLFQDTTE EDDRATMGSP AKTVIGICIF ITLISVGLYI FLGDGVRVAQ
QASQKPVSQE AVQKMVAEFA AKMEQDPDNL KGWAMLARSY RILGRTEDAA KAYGRAGTYL
DSDPELLAEY ADTLATIANG NFSGKPLQLI NQALKIDPNN FLALWLSGTA SYTSGNYKAA
VQTWEKLSKQ LPPNTDEARA IEGSIAEART KGGLSAPAVA STGKGISGVV ELSAELKSKV
KPGDVLMVIA RQPGERMPVA VLRESAAEFP MRFALNDALA MNPNQPLSKL PEVTLEVRIS
KTGMAKPEAG DLLSSPQTVK VGANQVHLIV NQVRQ
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