Gene Pnuc_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1479 
Symbol 
ID5052323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1556274 
End bp1557050 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content45% 
IMG OID640471652 
Productferredoxin--NADP(+) reductase 
Protein accessionYP_001156257 
Protein GI145589660 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTT ACAACACCGA AACCGTACTC ACCGTTCACC ACTGGAACGA CACTCTATTT 
AGTTTCACCA CTACCCGAAA CAAAGGTCTA CGTTTTCGTA GTGGGCACTT CTTGATGATT
GGCCTTGAAG TTGAAGGCAA ACCTTTGGTT AGGGCTTATA GCGTTGCCAG CCCAAATTAC
GAAGAGCATT TAGAGTTCTT GAGCATTAAG GTGCAAGACG GCCCCCTCAC CTCCCGTTTA
CAAAAAATTC AAGTGGGTGA TCCCATTTTG GTGAGCGAAA AGTCTGTTGG CACCTTAGTG
TTAGATGACT TGAACCCTGG AAAACATCTC TACCTATTTA GCACCGGCAC TGGCTTAGCG
CCATTCATGA GCATCATTCG TGATCCTGAA ACTTACGAGA AGTTTGAAAA AGTGGTTTTG
ATTCATGGCG TACGTTTAGT AAGCGAATTG GCTTACGCTG ACTACATCAG AGATGAACTC
ACTCAAGATG AATACCTAGG CGAACTCATT CGTGAAAAAC TGATCTACTA TCCAACAGTG
ACCCGCGAAG CATTCAAACA TACCGGACGC CTCACAACCG CAATTGAATC TGGTCAACTA
TTTAAAGATA TTGGTTTGCC ACCACTTGAT CCAGCAGTAG ATCGCGCCAT GATTTGCGGC
AGCCCTTCTA TGCTCAAAGA AACCTCTGAA ATGCTGGATG CTAAAGGCTT CAAGGTCTCT
CTAAGCCTGG GCCAGATGGG TGACTATGTA TTCGAACGTG CATTCGTAGA AAAATAA
 
Protein sequence
MAAYNTETVL TVHHWNDTLF SFTTTRNKGL RFRSGHFLMI GLEVEGKPLV RAYSVASPNY 
EEHLEFLSIK VQDGPLTSRL QKIQVGDPIL VSEKSVGTLV LDDLNPGKHL YLFSTGTGLA
PFMSIIRDPE TYEKFEKVVL IHGVRLVSEL AYADYIRDEL TQDEYLGELI REKLIYYPTV
TREAFKHTGR LTTAIESGQL FKDIGLPPLD PAVDRAMICG SPSMLKETSE MLDAKGFKVS
LSLGQMGDYV FERAFVEK