| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1444 |
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| Symbol | |
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| ID | 5052407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1515310 |
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| End bp | 1516443 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471616 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_001156222 |
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| Protein GI | 145589625 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAGCAC TTATCACTCT TGGCGCTTTT CTAGTTACTC TCGGGGTACT AGTGAGCTTT
CATGAGTTTG GCCATTTTTT AGCAGCGCGT GCTTGTGGAG TGCGGGTCCT GAGATTTTCG
ATTGGCTTTG GTAAACCCTT TTTTACCTAT CAAGCAAACA ATAAAACTGA GTGGACATTG
GCCCCGATTC CTCTTGGGGG TTATGTGAAA TTATTGGATG GGCGCGATCG TACTCAGTCT
ATTAGCTTGG TTGAACAATC AGAAGCCTAT GATTACAAAC CCTTGTGGAA AAGATCGCTG
ATTGTTGCAG CGGGGCCTTT TGCTAATTTT TTCCTGGCTA TCCTCCTTTT TGCCGGCTTA
TACCTCTCAG GGGTCCCTCA ATTGCCGGCT GTTTTACAAG CTCCCCCTGA GAATTCAATA
GCGGCTCAAT TGGACCTTAG GGCGGGGGAT CAGGTGCTGG GATGGCAGCA GCTGGATTCT
GGGGTTAAAT CTGTGCCCCT TTCTGGTGAA TTTAAGTCCA TCCCCAGCTG GAATGCTCTG
CGTTGGAGGC TAATGGATGC TCTAGCCGGC GAGTATGGCT TTGAGCTTGA GATGCTTGGG
CCTGATGGCC AGCGCTTCAC CAAAGTTTTT TTGGCTGAAG ATTTACCCCG CCTGAGTCCT
GATGCAGACC CCGTAGCTAA ATTGGGCATT TTGCCGGTAG CCACCCCTTT GGCGGGCTGG
AAGGAGCTGA AGTTGGGGCC TATCGACGCA GTGTGTTTTG CGGCAGAAAG GGTTTATCTG
ATTAGCAAGC TTTCCGTAAG GGTAATGGCT GGCATCGTTA CAGGAAAGAC ATCTTTTAAA
CAGCTCGGGG GGCCACTGAG TATTGCGGAC ATGGCCGGTA AGACTGCACA GGTTGGCTGG
CAGCCTTTTT TGGCATTTTT AGCACTAATG AGTATCAGTA TTGGAATATT AAATTTGCTA
CCTTTTCCCA TGCTTGATGG GGGTCAGCTC CTGTATGATG CATGGGAGTT GGTCGCTGGT
AAGCGGATTT CAATTTCAAG GCAGGAACAG CTCCAAAAAG CGGGCTTTTT CTTATTGATT
TTTATTTCCC TGCTGGCCTT GTTTAACGAT TTACAACGCT ATTTGTCGCC TTGA
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| Protein sequence | MQALITLGAF LVTLGVLVSF HEFGHFLAAR ACGVRVLRFS IGFGKPFFTY QANNKTEWTL
APIPLGGYVK LLDGRDRTQS ISLVEQSEAY DYKPLWKRSL IVAAGPFANF FLAILLFAGL
YLSGVPQLPA VLQAPPENSI AAQLDLRAGD QVLGWQQLDS GVKSVPLSGE FKSIPSWNAL
RWRLMDALAG EYGFELEMLG PDGQRFTKVF LAEDLPRLSP DADPVAKLGI LPVATPLAGW
KELKLGPIDA VCFAAERVYL ISKLSVRVMA GIVTGKTSFK QLGGPLSIAD MAGKTAQVGW
QPFLAFLALM SISIGILNLL PFPMLDGGQL LYDAWELVAG KRISISRQEQ LQKAGFFLLI
FISLLALFND LQRYLSP
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