Gene Pnuc_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1401 
Symbol 
ID5052422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1472782 
End bp1473336 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content47% 
IMG OID640471573 
Producthypothetical protein 
Protein accessionYP_001156179 
Protein GI145589582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATG GTTTTTTAAG TCGCTGGTCT CGCCGCAAGT TGGTTCAACA AGATGAGTCA 
ATTGATCGAG ATAAAGAACT TGCCAAGCCT TCTGAGGATA TAACACCTCA GGTTGAAGAC 
GCCATTCCTC CTGCCTCGCT AGAGGACGTT GAAAGGATTG ATTCATTAGC CCCCGACTTC 
TCCGCTTTTA TGAAGCCCGA TGTTGATCCT CAAGTTCAGC AGGCAGCACT TAAGAAGATG 
TTTACGGATC CGCACTTTAA TGTGATGGAC CGCCTCGATA TTTATATTGA TGACTATTCC 
CAACCCGACC CTTTGCCTAT GGGCATGTTG GAGAGAATGG CGCAAAGTGA AATGCTGAAT 
CTTTTCCGCA AGACGGACAA GGGTGCTGAT GAGTCGGCTA ATCCAGTCAA CTCAAAAGCC 
GCCACAACAG AGTCTGAACC GACTGCTATA GAGGCTCCTA TTCAAACTGA TTTAACATCC 
ACACCTGTAG CGTCGCAAGA AAACCCGGCG ATGATGGATG TGGTGCCATT AGAGTCAGAT 
AAGAAAAAAA CCTAA
 
Protein sequence
MADGFLSRWS RRKLVQQDES IDRDKELAKP SEDITPQVED AIPPASLEDV ERIDSLAPDF 
SAFMKPDVDP QVQQAALKKM FTDPHFNVMD RLDIYIDDYS QPDPLPMGML ERMAQSEMLN 
LFRKTDKGAD ESANPVNSKA ATTESEPTAI EAPIQTDLTS TPVASQENPA MMDVVPLESD 
KKKT