Gene Pnuc_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1399 
Symbol 
ID5052701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1470033 
End bp1470683 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID640471571 
Productcytoplasmic chaperone TorD family protein 
Protein accessionYP_001156177 
Protein GI145589580 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT TAGAGAAAGA AAACGATACA GAGAGCTTGT CAACCGAAGT GGGGGATATT 
GGATTACCTG AGGATCTTGC AAGATCAGAC CTATATGGTT TGATTGCCCG GTTTTTTCAT 
CTTCCGCCTG ATCAAGAATT ATTAGATCAA ATTGCTGCAA CAGCTGAGCA GCAAGATACT 
GCTGATGAAG CGCCATTAGC CCAGTTTTGG ATGGACGTAG TTGAGGTGGC AAAAAATAAC 
CCAGCCAAGG CTTGGCACGA CGAATTTGAC TTGAACTTCA TCAGTGTGGG GCGGCCAAAC 
GTGGTGCTAA ATGCTTCCTT TTATTTGGCT GGCCATCTGA ATGAGCGGCC TTTAGTCAAT 
ATTCGCAAGG CATTAGAGGA ATTTGGCCTA GAGTCTGCCC AAGAAGTTAC CGAGACGGAA 
GACCATATTT CAGCTCTCTG TGAGGTGATG CGGTATTTGA TTGCTGGGGA CGATGTCGAG 
ATATCAAACC TTACAAACCA AAGGGTTTTT TTCAATGAAC ACATCCGCCC TTGGTATGAC 
GAATTGTGCT ATGCAATCGA GGGCATTCCT GAGATGCATC TTTACCATCC GGTTGCCGCG 
CTAACCCGAG AATTTCTGGC CATTGAGGGG CAGAGTTTTG ACATGATTTA A
 
Protein sequence
MTELEKENDT ESLSTEVGDI GLPEDLARSD LYGLIARFFH LPPDQELLDQ IAATAEQQDT 
ADEAPLAQFW MDVVEVAKNN PAKAWHDEFD LNFISVGRPN VVLNASFYLA GHLNERPLVN 
IRKALEEFGL ESAQEVTETE DHISALCEVM RYLIAGDDVE ISNLTNQRVF FNEHIRPWYD 
ELCYAIEGIP EMHLYHPVAA LTREFLAIEG QSFDMI