| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1234 |
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| Symbol | |
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| ID | 5052153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1296493 |
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| End bp | 1298130 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471406 |
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| Product | ABC transporter related |
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| Protein accession | YP_001156013 |
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| Protein GI | 145589416 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGC TGCGTTACGA AGACTTGTGT ATTTCTTTTG GATCCGGACG GCGAGAAAAA
TTTGCTGTGA ACCATCTCAA TTTGGAGGTT GGCATTGGTG AGCGGGTAGC TTTGGTAGGT
GAATCAGGTT CCGGCAAGAC GCTGACTGCG CTGGCACCCT TAAGACTTGA GCCAGAAGGT
GCAAAGGTTT CTGGAAAAAT TCTGTGGAAT CAAAAAGATG GCAAGGGGGA AGTCGATCTT
CTCTCGCTGC CTATTCAAGA TATACGGGAA ATCCGTGGAC GTGAAATCGC TATGGTGTTT
CAAGAGCCGA TGACAGCATT AAACCCCTTG TTTACTATTG GCAATCAAAT TATTGAAGCA
GTGCAAATTT ATCAGCCACT GATTTCAAAG TCTGACTGCA CTGATGCGGC GATTGATCTT
TTGAAAAAGA CCGGCATTCC AGAGCCTGAG CGCCGTTTTT ATTCCTACCC GCACCAACTA
TCGGGGGGTC AACGTCAACG CGCTATGATT GCAATGGCTT TGGCTTGTAA GCCACGCCTT
TTGATTGCCG ACGAGCCTAC AACGGCCTTA GATGTGAGTT TGCGTTTGCA AATTCTGGAT
TTGCTCAAAG AGTTGCAAGA AGAATCTAAA GAGCATGGCG GCATGGGAAT TTTATTAATT
ACCCATGACC TCAATTTGGT AAAACATTTT GCCCAGCGGG TAGCCGTACT TAATCAAGGT
AACTTGATGG AGGCTGGCAC CACTAAACAA GTATTTGAGC ATCCTACTGA TGTCTACACT
CGTGCCTTAG TTAATAGCGA GCCAGTACGT GATTTGGCGC CCGTCATTCC TTTGGCGCCA
GTACTATTGC AAACAGAGGC GCTTTCGGTG GCTTATCCAA GCTCTGAATC AAGCTCTTGG
TTCAAAAAGA CACCAGCCCA CAAGGTCCTA AAAAAGGTGA GCTTTACGCT TAAGCAGGGT
CAAACCATTG GCGTCATTGG AGAGTCGGGT TCGGGTAAGA CTACTTTAGG CATGGCGGTG
CTAGGTTTAT TGGGCGATTC ATCTGCAGAG GTCAGTGGCA GTGTTGACGT GCTCGGTCAA
GATTGGCAAA CATTAAAACC GGCGCAGCGT CGTGCAATGC GCTCTAGCTT GCAGGTGATT
TTCCAAGATC CATTTGGATC TTTATCGCCT CGCATGAATG TCATGCAAAT CATCTCGGAG
GGATTGGACG CCCATTTTCC AAAGTTAAGT TTGGTTGAGC GTGAATCACG GGTGGTGGAT
ATGCTCAAGG AGGTTGGTTT AGATCGATCT GCTTTAACAC GCTATCCCCA TGAATTTTCT
GGTGGCCAAC GCCAACGCAT TGCAATTGCA CGTGCATTAA TCTTACGTCC TCAAATATTG
GTGTTAGATG AACCCACCTC AGCATTGGAT GTCTCGATTC AAAAACAAGT GCTGGCTTTG
TTATCTGAAT TGCAAAAAAA ATACAACCTC GCCTACCTCA TGATTAGTCA TGACTTAGCG
GTTATTCGGG CGATGTCCCA TGAGGTCATG GTGCTCAAGG AGGGAAAGGT GGTGGAGTTT
GGGGATACCG AAACCCTCAT CAAGCATCCA CGCCAGACTT ATACGAAGGA GTTATTTGCT
GCGGCAGAAC TGACATAA
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| Protein sequence | MSLLRYEDLC ISFGSGRREK FAVNHLNLEV GIGERVALVG ESGSGKTLTA LAPLRLEPEG
AKVSGKILWN QKDGKGEVDL LSLPIQDIRE IRGREIAMVF QEPMTALNPL FTIGNQIIEA
VQIYQPLISK SDCTDAAIDL LKKTGIPEPE RRFYSYPHQL SGGQRQRAMI AMALACKPRL
LIADEPTTAL DVSLRLQILD LLKELQEESK EHGGMGILLI THDLNLVKHF AQRVAVLNQG
NLMEAGTTKQ VFEHPTDVYT RALVNSEPVR DLAPVIPLAP VLLQTEALSV AYPSSESSSW
FKKTPAHKVL KKVSFTLKQG QTIGVIGESG SGKTTLGMAV LGLLGDSSAE VSGSVDVLGQ
DWQTLKPAQR RAMRSSLQVI FQDPFGSLSP RMNVMQIISE GLDAHFPKLS LVERESRVVD
MLKEVGLDRS ALTRYPHEFS GGQRQRIAIA RALILRPQIL VLDEPTSALD VSIQKQVLAL
LSELQKKYNL AYLMISHDLA VIRAMSHEVM VLKEGKVVEF GDTETLIKHP RQTYTKELFA
AAELT
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